Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1221 ATGGCCACGTTTGCTGGTTTCTTGGGCAAGTTCTTCTCTTTTTTCATCCTCTTTGTCCATCTCGGCTGCTTCATCTTCCCCTCCTCCGCCACTGGAGCCTCCGGCGGTGAAGCGGCAGAACAAGGTGGCCGGAAGTCTTCTTCAAAGAAACGCAAGGTATCCCCTGTTCCGCACTCGCGGAAACCTTCTCCTTCACATCCCAAGTTCAAAACCCGTAAGGCTCTTTCTTCTTCTTGGACTTTCGTCAAACACCTTTTCTCCCACAAAGCCTGCAAAACCAGTGACGTTGCTCAGGGATCGCCGCAATCCTCCGCCTCCACTGCTATTTCCTCTGCTTCCGCCGTATCCGCCGCACTGCCTTCTTTGACATCCACTAGATCCTCTCAGCAGTCGTTGGTCTCTCTGGCGCAGGACGAATCGCACGCGCTGGATCTTCCCGGGAAAAAACCGTTTGCCTCGTGCCCGGAATCCGATATCACCGCCGACAACAACCACTTCTTCCCCCTCCGCAACGACATCTTCCCCTGCACTGCCTGCGGCGAGGTTTTCCAGAAACCGCAAGTTCTCGAACAGCATCAATCGTTGAAACACGCCGTGTCGGAGCTGGTGGAGACCGACGCGGGCCACAACATAGTGCAGATAATATTCAAGTCGGGTTGGACCAACACACAGAAATGCCCCAAAATAAGTCGGATCCTGAAGATCCATAACCACCCGAAGATAGTCTCCAAGTTCGAAGAATACAGAGAGACGGTGAAGGCCAAGGCCGCCCGAAACGGCGCCGTAAAGAAGCGTGACGAAAGATGCATAGCCGATGGCAACGAGCTCATGAGATTCCACTGTTCCACATTCCTCTGCGACTTAGGACTGAACGGGAATTCCGGCATTTGTGCCCAGCAATATTGTAACATCTGCGGGATCATCAAATCGGGGTTCTCACCCAAGCTGGACGGAATCTCCACGCTATCGACGAGCTGGAGGGCGCACGTGGCCATACCAGAGGAGGTGGAGGAGGAGTTCAAGTTCATGAACGTGAAGCGGGCTATGCTGGTATGCAGGGTCATAGCGGGTCGGGTCGGCACTGACTCGGACGAAGCGGACAAAGAGGACGGGGGTTTTGATTCGGTGATGGCGCGCGGCGGAAGTGGAGTTTACACCCGGCTGGACGAAGAAGAGCTGTTGGTGTTCAATCCTAGAGCTGTGCTTCCATGCTTTGTGATTGTGTATGGCGTGTGA 1236 0.5445 MATFAGFLGKFFSFFILFVHLGCFIFPSSATGASGGEAAEQGGRKSSSKKRKVSPVPHSRKPSPSHPKFKTRKALSSSWTFVKHLFSHKACKTSDVAQGSPQSSASTAISSASAVSAALPSLTSTRSSQQSLVSLAQDESHALDLPGKKPFASCPESDITADNNHFFPLRNDIFPCTACGEVFQKPQVLEQHQSLKHAVSELVETDAGHNIVQIIFKSGWTNTQKCPKISRILKIHNHPKIVSKFEEYRETVKAKAARNGAVKKRDERCIADGNELMRFHCSTFLCDLGLNGNSGICAQQYCNICGIIKSGFSPKLDGISTLSTSWRAHVAIPEEVEEEFKFMNVKRAMLVCRVIAGRVGTDSDEADKEDGGFDSVMARGGSGVYTRLDEEELLVFNPRAVLPCFVIVYGV 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1221 411 ProSitePatterns Zinc finger C2H2 type domain signature. 176 197 IPR013087 -
Acco10g1221 411 MobiDBLite consensus disorder prediction 35 72 - -
Acco10g1221 411 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 77 409 - -
Acco10g1221 411 Gene3D - 197 410 - -
Acco10g1221 411 MobiDBLite consensus disorder prediction 48 68 - -
Acco10g1221 411 ProSiteProfiles Zinc finger C2H2 type domain profile. 174 202 IPR013087 -
Acco10g1221 411 SUPERFAMILY ADP-ribosylation 199 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1221 Acco-ChrAcco10 26136818 26138053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1221 79 411 C2H2 Transcription Factor Family AT2G29660 53.779 7.60e-107 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco10g1221 None None None