Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1196 ATGAAGAAGACCCCAGAACGCCATTTTGTTCATTCAAGCCCAAGTAGTCAGAATATAGGCAATTATGATACAAATAAGCACAATCAAAGGACTCGTCCTTCTCTCAAATATTTCAAATCTTTTGTCAAAAAATTCGCAGTTTTAGTTGCAATCTTTCGCTCTGGCAAGAAAAAATCAGCTGCGGAAGTTTCTGGAGGTGAGATCACAAGGAATAGAAGTAGAGTCAGATTGGTACCATCATTTTCAACTGATGTATCATCTGAGAGTAACAACAAGAATTCATCATGGAAGTTTTCTAATTCCTTCGCAACTTCTAGTGCCACAAGTGGGCAACTTGGAATGGGGAATTTCTCTTTTGAAGAACTTTACAAGGCAACAGGAAAATTTTCTGCAGATAAAATAATTGGGGAAGGTGGATTTGGAACTGTCTATATGGGGAAGCTTGATGATGGATCTCTTGTTGCCATAAAGCGCTCCAAGAAGTCTGTGCATGACAAGAACTTAGCTGAATTTAAGAATGAAATAAATACCTTGTCAAGAATTGAGCATCTGAATCTTGTGAGGTTATACGGATATTTGGAGCATGAAGATGAAAAGATGATTGTTGTTGAATATGTTGGCCATGGAACACTTCGAGAACATTTGAATGGTACAAGGGGAAACGGACTCGAAATTGGTGAGCGCCTAGACATTGCAATTGATGTTGCTCATGCAATAACTTACCTTCATATGTACACAGATCATCCAATAATCCATAGAGACATCAAATCATCCAATATCTTAATCACAGAAAAACTGAGGGCTAAAGTTGCAGACTTTGGATTTGCTCGTTTGGCTTCAGATGATCCTGCAGCAACCCACATCTCAACCCAAATAAAAGGAACAGCTGGCTACTTGGATCCTGAGTATCTCCGAACATATCAACTCACTGCCAAGAGCGATGTTTATTCATTCGGCGTATTGCTTGTAGAATTGATGACAGGGAGATATCCATTAGAACCAAAGAAACCTCTCAGTGAGAGAGTGACCATCAGATGGGCAATGCAGATGCTGAAACAAGGAGATGTCGTCATAGCCATGGACCCCAGGCTGTGGAGAAACCCAGCTTCAACCATGGCAGTGGAGAAGGTTATGAATCTTGCCTTACAATGTCTTGCGCCGTTGAGGCAGTCACGACCTTCCATGAAGATTTGTGCAGAGATTCTTTGGGGAATCAGAAAAGAGTTGAAAGATCAAGCTTTGGCTCATGTTCCCCCTCTTGCTTCACACCATTCTGCAGATTTCATTAATAATGGTGATGACGATAAGAAGAGAAATAAGCTTGTGTCATCACTTGATGATGATGAAGATGGCAGCGACAACTATAAAAAATTTGTCTCTGCGTGA 1386 0.4062 MKKTPERHFVHSSPSSQNIGNYDTNKHNQRTRPSLKYFKSFVKKFAVLVAIFRSGKKKSAAEVSGGEITRNRSRVRLVPSFSTDVSSESNNKNSSWKFSNSFATSSATSGQLGMGNFSFEELYKATGKFSADKIIGEGGFGTVYMGKLDDGSLVAIKRSKKSVHDKNLAEFKNEINTLSRIEHLNLVRLYGYLEHEDEKMIVVEYVGHGTLREHLNGTRGNGLEIGERLDIAIDVAHAITYLHMYTDHPIIHRDIKSSNILITEKLRAKVADFGFARLASDDPAATHISTQIKGTAGYLDPEYLRTYQLTAKSDVYSFGVLLVELMTGRYPLEPKKPLSERVTIRWAMQMLKQGDVVIAMDPRLWRNPASTMAVEKVMNLALQCLAPLRQSRPSMKICAEILWGIRKELKDQALAHVPPLASHHSADFINNGDDDKKRNKLVSSLDDDEDGSDNYKKFVSA 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1196 461 ProSitePatterns Protein kinases ATP-binding region signature. 135 157 IPR017441 GO:0005524
Acco10g1196 461 Gene3D Phosphorylase Kinase; domain 1 87 205 - -
Acco10g1196 461 FunFam receptor-like protein kinase FERONIA 89 205 - -
Acco10g1196 461 SUPERFAMILY Protein kinase-like (PK-like) 105 404 IPR011009 -
Acco10g1196 461 MobiDBLite consensus disorder prediction 10 28 - -
Acco10g1196 461 MobiDBLite consensus disorder prediction 425 461 - -
Acco10g1196 461 Pfam Protein tyrosine and serine/threonine kinase 131 401 IPR001245 GO:0004672|GO:0006468
Acco10g1196 461 MobiDBLite consensus disorder prediction 428 455 - -
Acco10g1196 461 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 206 416 - -
Acco10g1196 461 ProSiteProfiles Protein kinase domain profile. 129 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1196 461 MobiDBLite consensus disorder prediction 1 29 - -
Acco10g1196 461 Gene3D Transferase(Phosphotransferase) domain 1 207 419 - -
Acco10g1196 461 SMART serkin_6 129 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1196 461 PANTHER OS01G0750732 PROTEIN 70 433 - -
Acco10g1196 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1196 Acco-ChrAcco10 25820282 25823319 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1196 88 412 Receptor kinase-like Gene Family AT4G39110 40.588 1.92e-68 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Acco10g1196 PK_Tyr_Ser-Thr 5.9e-51 CL0016