Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1181 ATGACTGACAAGCTCGGAGCTCTTGAAAAGCGTTTGTTAATTGACAAGCTCATCAAGCACATTGAGAATGATAATCTCCAGTTACTGCAGAGACTAAGAGAAAGGATCGAGAGAGTGGATGTGAAGATTCCTACTGTGGAGGTCAGGTACAAGAACCTGCATGTAGCAGCAGAATGTGAGGTTGTACAGGGGAAGCCACTTCCTACACTGTGGAACTCAATTACTAGCTTCTTTTCAGGTGTTATGAAGGCAGTGTCTTGTACTTCTCAATGTACCAACATAAGCATTCTGAAGGATGTAAGTGGCATCATAAAGCCATCAAGGCTTACACTTCTCCTTGGCCCACCTGGCAGTGGGAAAACGACCTTGCTATTGGCACTGGCCGGAAAACTTGAGCAATCTCTCAAGGTGACTGGAGAAGTCTCTTACAACGGTCACATGCTAGATGAATTTGTTCCTCAAAAAACATCATCATATATAAGCCAGTATGACCTGCACATACCTGAGATGACAGTGAGGGAAACAATTGACTTTTCAGCCCAATGCCAGGGGGTTGGCGACAGAGTTGATATATTGGCTGAAATCACAACCAGAGAGAAAGATGCAGGAATCATCCCCGACCCAGATATTGATGCCTATATGAAGGCAATATCAGTTGAAGGACAACAAGAAAATCTACAAACTGATTATGTTCTGAAGATTCTTGGGCTTGATATCTGCGCTGACACAATGGTTGGTGATGCATTAGATAGGGGCATTTCAGGTGGACAGAAGAAAAGGCTAACAACAGGAGAGATGATTGTTGGTCCCAAAAAAACTTTGTTTATGGATGAAATATCAACGGGCTTGGACAGCTCCACAACTTTTCAAATAATTACCTGCCTCCAGCAGTTGGTGCACATCACAGATGCAACAGCAGTGGTTTCACTTCTTCAGCCAGCTCCTGAAACCTTTGAATTATTTGATGATCTTATACTGATAGCTGAGGGGAAGATTGTATATCATGGCCCATGCGGTCAAGCACTCCAGTTTTTTGAGGAATGTGGTTTCAAGTGTCCTGAAAGGAAAGGAGTTGCAGACTTTCTCCAGGAAGTAACCTCTAAGAAGGATCAAGGGCAATACTGGTATCATACAGACACTCCTTACAACTATGTTTCTGTGGATGAGTTCTCTAAAATTTTCAAAACAAGTTATTGGGGACGAAGTTTAGATGATGAGCTCTCAAAGCAATGTGATAAATCTCAATCCCAGAAAAATGGTTTATCATTTAACAAGTATTCCCTGGGGAAATGGAAATTGTTCAAAGCTTGCATGAGGAGGGAGATACTTCTCATGAAACGAAACTCCTTTATCTACGTATTCAAAACTGCACAGCTCACAATCACAGCAATCATAACAATGACAGTATTTATACGCACTCAGTTGAATGTAGACATAAAGAGTGCAAACTTTTTACTAGGCTCATTGTATTACACACTTGTCCGCCTCATGACTAATGGAGTCGCTGAGCTGATCTTGACTATTACCAGACTTCCTGTTGTTTACAAGCAGAAGGAATTCTATCTATATCCAGCATGGGCTTACTGTATTCCAGCTTCCATTCTAAAGATCCCATTTTCAGTTATTGATTCAATTGTCTGGACTTCAGTAACTTATTACGTTATAGGCTACAGCCCCGAAGTAGAAAGGTTCTTCCGTCAGTTTCTTCTACTTTTCGCTCTGCATTTATCATCAACATCCTTCTGCCGGTTCCTTGCCTCGGTTTTCCAAACTGATGTTGCTGCTACAACAGTCGGTTCCTTGTTCTTAGTACTGATGTTTTTGTTTGGAGGCTTCATTCTTCCTAGACCTTCATTACCATCGTGGTTGAGGTGGGGCTTTTGGCTCTCTCCCATGACATATGGAGAAATTGGATTAACAATAAATGAATTTCTAGCTCCTCGCTGGCAGAAGATGCAAGAGGGAGGCATCTCCATAGGGAGGCAGGTTTTAACTAGTCGTGGTTTAGACTTCAATGCAAACTTCTACTGGCTATCAATTGGGGCATTGCTTGGTTTCACAGTACTTTTTGATTTTGGATTTATCTTAGCATTAAGTTACTTAAAACCTCCAAAGATGTCTCGAGCTTTCGTTTCCAAAGCAAAGGCCTCTCAACTACAAGGGGGAGAAAATGGCAAAAGCGTGGAGCTAGAAGATAAATCAGTTACAGTTGACATTAGCCTGACCTCAAAGGAAATACAACAAAACACAGGAAAAATGGTCCTGCCCTTTCAGCCACTGACAGTAGTATTCAAGGATGTCCAGTATTTTGTCGACACCCCTCCAGAAATGAAAAGGCATGGGTCCAATGAGAAAAAACTTCAACTGCTCCGTGATATCACTGGAGCATTTAGGCCTGGAGTTCTCACAGCACTGATGGGAGTGAGTGGAGCAGGGAAAACAACTCTTATGGATGTACTTTCAGGGAGAAAAACTGGAGGTATCATTGAAGGAGATATAAGAATTGGAGGATTCCCCAAAGTGCAGAAGACATTTGCAAGAGTTTCAGGTTACTGTGAGCAGGTTGACATACATTCCCCATATATAACAGTTGAAGAATCTGTAAAATACTCAGCATGGTTGCGATTACCAATGGAGATTGATTCAGTCACAAAAGAGAAATTTGTAGAAGAAGTCATTGAAACAATAGAACTTGATGATATAAAGGATCGTTTAGTTGGCATAGCTGGCCAAAGTGGCTTATCAACTGAACAACGTAAAAGACTTACCATTGCAGTGGAGCTTGTTTCCAATCCATCGATAATCTTTATGGATGAACCAACATCAGGTTTGGATGCCCGAGCAGCTGCCATAGTTATGCGTGCAGTGAAGAATATGGTCGCCACGGGCAGGACCACGGTTTGCACCATACACCAACCAAGCATTGACATATTTGAGACTTTTGATAAGTTGATTGTTATGAAAGCAGGAGGACAGATTATCTATAATGGAAAACTCGGTCACCAGTCGAGCAGACTGATTGAATACTTTCAGAGCATACCAGGAGTGCCAAAGATCAAAGACAATTATAATCCTGCAACCTGGATGCTAGAAGCTACCTCTGCACCTGTAGAAGCAGAACTTAAAGTAGACTTCGCCAAAATCTATAAGGAGTCACCTCTTTACCGGAACACCCTTGAATTGGTTCAAGAGTTGAGTGACCCATCGCCAGGTTCAAAGGACTTACAATTCTCGACTCATTTTCCACAAAATTACTTGGGCCAGTTTACAGCATGTCTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCTGAATACAACTTGAGACGTTTTGTGTTCATGATTGTTGCAGCAGTAATATTTGGGGCAGTATTTTGGCAGAAAGGGAAGGAAATAAACAATGAGCAGGATTTGTTCAATATACTCGGATCAATGTATATTGCTGTAATATTCTTGGGCATAAATAACTGTTCATCAATCTTACCATATGTGGTAACTGAGCGCACTGTCTTGTACCGTGAAAAATTTGCTGGAATGTATTCTTCCAAAGCGTACTCATTTGCACAGGTGACCATTGAGATACCCTATATCTTAGTGCAAGCCATTGTATATGTGGCTATCACTTATCCGATGATAGGTTACCAATGTTCGGTTGAGAAGATCTTTTGGTACTTCTACACCACATTCTGTACATTTTTGTACTTCGTATATCTCGGAATGTTGATAGTTTCGTTGAGCTTGAATCTCGATTTAGCTTCCATACTCTCAACTGCAGTCTACACCATATTCAATCTTTTCTCTGGATTCCTCATGCCAGGACCGAAAATTCCTAAATGGTGGGTTTGGTGTTATTGGCTTTGCCCCACAGCCTGGTCTCTGAATGGCCTCTTGACTTCACAGTATGGAGACATCGACACGAACATAACCGTACTTGGGAACCCAAAGCCAGTTGCAGTAGATGCCTTTCTGAAAGACTATTATGGGTTCCATCACGATCGGTTGAACATTGCGGGTGTGGTTCTCATTGCTTTCCCAATTGTTTATGCATTTCTATTTGCCTATTGCATAGGGAAATTGAATTTTCAGAAAAGGTAG 4095 0.4164 MTDKLGALEKRLLIDKLIKHIENDNLQLLQRLRERIERVDVKIPTVEVRYKNLHVAAECEVVQGKPLPTLWNSITSFFSGVMKAVSCTSQCTNISILKDVSGIIKPSRLTLLLGPPGSGKTTLLLALAGKLEQSLKVTGEVSYNGHMLDEFVPQKTSSYISQYDLHIPEMTVRETIDFSAQCQGVGDRVDILAEITTREKDAGIIPDPDIDAYMKAISVEGQQENLQTDYVLKILGLDICADTMVGDALDRGISGGQKKRLTTGEMIVGPKKTLFMDEISTGLDSSTTFQIITCLQQLVHITDATAVVSLLQPAPETFELFDDLILIAEGKIVYHGPCGQALQFFEECGFKCPERKGVADFLQEVTSKKDQGQYWYHTDTPYNYVSVDEFSKIFKTSYWGRSLDDELSKQCDKSQSQKNGLSFNKYSLGKWKLFKACMRREILLMKRNSFIYVFKTAQLTITAIITMTVFIRTQLNVDIKSANFLLGSLYYTLVRLMTNGVAELILTITRLPVVYKQKEFYLYPAWAYCIPASILKIPFSVIDSIVWTSVTYYVIGYSPEVERFFRQFLLLFALHLSSTSFCRFLASVFQTDVAATTVGSLFLVLMFLFGGFILPRPSLPSWLRWGFWLSPMTYGEIGLTINEFLAPRWQKMQEGGISIGRQVLTSRGLDFNANFYWLSIGALLGFTVLFDFGFILALSYLKPPKMSRAFVSKAKASQLQGGENGKSVELEDKSVTVDISLTSKEIQQNTGKMVLPFQPLTVVFKDVQYFVDTPPEMKRHGSNEKKLQLLRDITGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIGGFPKVQKTFARVSGYCEQVDIHSPYITVEESVKYSAWLRLPMEIDSVTKEKFVEEVIETIELDDIKDRLVGIAGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAIVMRAVKNMVATGRTTVCTIHQPSIDIFETFDKLIVMKAGGQIIYNGKLGHQSSRLIEYFQSIPGVPKIKDNYNPATWMLEATSAPVEAELKVDFAKIYKESPLYRNTLELVQELSDPSPGSKDLQFSTHFPQNYLGQFTACLWKQHLSYWRSPEYNLRRFVFMIVAAVIFGAVFWQKGKEINNEQDLFNILGSMYIAVIFLGINNCSSILPYVVTERTVLYREKFAGMYSSKAYSFAQVTIEIPYILVQAIVYVAITYPMIGYQCSVEKIFWYFYTTFCTFLYFVYLGMLIVSLSLNLDLASILSTAVYTIFNLFSGFLMPGPKIPKWWVWCYWLCPTAWSLNGLLTSQYGDIDTNITVLGNPKPVAVDAFLKDYYGFHHDRLNIAGVVLIAFPIVYAFLFAYCIGKLNFQKR 1364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1181 1364 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 3 1364 - -
Acco10g1181 1364 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 786 998 IPR027417 -
Acco10g1181 1364 Pfam ABC-2 type transporter 433 644 IPR013525 GO:0016020|GO:0140359
Acco10g1181 1364 Pfam ABC-2 type transporter 1088 1300 IPR013525 GO:0016020|GO:0140359
Acco10g1181 1364 Pfam ABC transporter 97 279 IPR003439 GO:0005524
Acco10g1181 1364 FunFam ABC transporter G family member 34 776 1008 - -
Acco10g1181 1364 FunFam ABC transporter G family member 34 85 388 - -
Acco10g1181 1364 CDD ABCG_PDR_domain2 759 997 IPR034003 -
Acco10g1181 1364 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 762 1014 IPR003439 GO:0005524
Acco10g1181 1364 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 82 354 IPR003439 GO:0005524
Acco10g1181 1364 Pfam ABC transporter 790 942 IPR003439 GO:0005524
Acco10g1181 1364 SMART AAA_5 106 339 IPR003593 GO:0016887
Acco10g1181 1364 SMART AAA_5 799 991 IPR003593 GO:0016887
Acco10g1181 1364 CDD ABCG_PDR_domain1 93 336 IPR034001 -
Acco10g1181 1364 Gene3D - 777 1009 IPR027417 -
Acco10g1181 1364 Gene3D - 82 348 IPR027417 -
Acco10g1181 1364 Pfam ABC-2 type transporter 312 364 IPR043926 GO:0140359
Acco10g1181 1364 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 353 IPR027417 -
Acco10g1181 1364 Pfam Plant PDR ABC transporter associated 649 711 IPR013581 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1181 Acco-ChrAcco10 25686958 25696116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1181 762 974 Calmodulin-binding Proteins AT2G36910 26.126 4.78e-06 49.3