Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1153 ATGGCTGGAACCCTAATTCATCCGTTCCCCACCGTCAGTTCTGTCCGTTCCTCTTATTCCAACGGTGCTGCCACTTCCTCCGTCAGGTTTCTTCCGCATCAGTGTAGGGCTTCGATGCCATCTTTTGCGACTGAGACCAGATCTGCGGCGGTCTCATCTCGGCGCCCGGCGAGCCTCTATGAGGTGCTTCGAGTAAGCCAGAACGCTTCGCCTAGGGAGATCAAATCGGCCTACCGGAGTCTGGCTAAGATCTACCATCCGGATTCGGCGCCGCACCGATCGGAGCCTGAGGACGACCAGGACTTCATCGAGATCCACAACGCTTACGCCACGCTCTCTGATCCTTCGGCCAGAGCGATCTACGATCTATCTTTGATGGCTGTTCATGGAAGGAGGCCCCAGGTGTCGCTATCATCGATTCAGAATTCCACTTCTGGGTTTTATACGACCCGCAGATGGGAAACCGATCAATGCTGGTAG 480 0.5542 MAGTLIHPFPTVSSVRSSYSNGAATSSVRFLPHQCRASMPSFATETRSAAVSSRRPASLYEVLRVSQNASPREIKSAYRSLAKIYHPDSAPHRSEPEDDQDFIEIHNAYATLSDPSARAIYDLSLMAVHGRRPQVSLSSIQNSTSGFYTTRRWETDQCW 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1153 159 CDD DnaJ 60 114 IPR001623 -
Acco10g1153 159 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 13 159 - -
Acco10g1153 159 Pfam DnaJ domain 59 122 IPR001623 -
Acco10g1153 159 SUPERFAMILY Chaperone J-domain 57 148 IPR036869 -
Acco10g1153 159 ProSitePatterns Nt-dnaJ domain signature. 102 121 IPR018253 -
Acco10g1153 159 ProSiteProfiles dnaJ domain profile. 58 125 IPR001623 -
Acco10g1153 159 PRINTS DnaJ domain signature 78 93 IPR001623 -
Acco10g1153 159 PRINTS DnaJ domain signature 97 117 IPR001623 -
Acco10g1153 159 PRINTS DnaJ domain signature 60 78 IPR001623 -
Acco10g1153 159 Gene3D DnaJ domain 43 143 IPR036869 -
Acco10g1153 159 SMART dnaj_3 57 117 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1153 Acco-ChrAcco10 25440798 25441277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1153 60 122 C2H2 Transcription Factor Family AT1G74250 50.000 1.39e-10 56.6