Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1140 ATGAGCGATTCTGCTTACAGAGTTGAAACCACTTCGCGTCTTGCCCAATGGAGAATCGAAAACCCTGCTTCCTGCAGTTATCGAAAATCTGATCCTTTCAGGATCGGCAAGTGGAATTGGCATTTGGCCGTCGAGAAGAACAGGGTTTTATTTATAAAACTATATCCAGAAATATCAAATCTAACCAGAGACAACCCGCCGATTGCATCTTTCATCATCCGGGTCGTTAGTTCTGCTTCGGATCGCAAGGCCTTAACCCATCCAGTAGTAAAAGACAGATTGATCAAGAACAGCGAAGACTTTGTTTGGCCACTTGAGGTTCCAGTAACTGGGAAATTCATTATTGACGTCGAGTTCCTTGATTTGAAGACAGCATCCCCAAACGGTGGGGAACCTTGCTCCATCTGGGCCACAGGACCTACGCCGAAGGAATCTAATGCAACAGCTCTTGAAGCTCTTGGTCGGATGCTAACTGAAGGAATCCACACAGACATAGTGATCAATGCATCTGATGGAAGCATTGGAGCTCATCGCGCTGTTCTTGCTGCTCGATCTCCTGTCTTTCACAGCATGTTCTCGCATAACCTTAAGGAGAAGGAGCTATCAACCATAAACATCGAAGATATGTCCATTGATGCTTGCCAGGCATTCCTCAAATATCTTTATGGTAGCATAAAAACTGAAGAATTTCTCACACACAGGCTTGTCCTTCTTCATGCTGCTGACAAGTATGACGTATCTGACCTGAAAGAGGCATGCCATGAAAGCCTTGTAGAAGATATTGATACCAAAAATGTTCTCGAGAGGCTTCAAAATGCATCCCTGTACCAGTTGCCAAAACTGAAGAGTAGCTGTTTACGGTATCTCGTAAAATTTGGTAAACTATTTGATGTTCGCGAGGATTTCAACTCCTTCCTGCAGTGTGCAGATAGGGATCTGATTACTGAAGTATTCCATGAAGTTTTAAATGCCTGGAGAGGGTTCTGA 987 0.4407 MSDSAYRVETTSRLAQWRIENPASCSYRKSDPFRIGKWNWHLAVEKNRVLFIKLYPEISNLTRDNPPIASFIIRVVSSASDRKALTHPVVKDRLIKNSEDFVWPLEVPVTGKFIIDVEFLDLKTASPNGGEPCSIWATGPTPKESNATALEALGRMLTEGIHTDIVINASDGSIGAHRAVLAARSPVFHSMFSHNLKEKELSTINIEDMSIDACQAFLKYLYGSIKTEEFLTHRLVLLHAADKYDVSDLKEACHESLVEDIDTKNVLERLQNASLYQLPKLKSSCLRYLVKFGKLFDVREDFNSFLQCADRDLITEVFHEVLNAWRGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1140 328 Gene3D Potassium Channel Kv1.1; Chain A 139 291 IPR011333 -
Acco10g1140 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Acco10g1140 328 Pfam BTB/POZ domain 156 259 IPR000210 GO:0005515
Acco10g1140 328 PANTHER OS08G0495500 PROTEIN-RELATED 5 327 IPR044714 -
Acco10g1140 328 SUPERFAMILY POZ domain 148 259 IPR011333 -
Acco10g1140 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Acco10g1140 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1140 Acco-ChrAcco10 25342926 25344689 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Acco10g1140 BTB 5.8e-23 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1140 10 25342926 25344689 Acco05g0685 05 10182875 10187563 CCT
Acco10g1140 10 25342926 25344689 Acco10g1140 10 25342926 25344689 ECH