Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1123 ATGCTTGGAAGCTTAAGAAATCCCTCACTTTCTCCCAGATTCTCCTCACTTCTCTCAATAAACTCTCTTTTCTTCTGCTTCTTCTTCTTCTTCTTCTTCTCATGTTGCTACTCCATTGATGAACAAGGCCAAGTTCTTCTTGCATGGAAGAACAATTTGAACAGTACAGGAGATGCACTATTAGCATCTTGGAATCCTTCAGATTCAAGCCCTTGCAAATGGGTCGGTGTTGGCTGCAACTCCAGAGGGGAAGTGGAGGAGATAAGCTTGAAATCTGTGGACCTGAGGGGCTCATCATTGCCTTCAAAGTTCCAAGCTTTAAAAAAGTCCTTGAAGGTTCTTGTCCTGTCTTCAACCAACCTCACAGGTTCTATCCCCAGAGAAATTGGAGACTGTGAGGAGCTTGTTTCTATTGATCTCAGTGGGAATTATCTCTCAGGTGAAATACCAGTAGATATTTGCAGGCTGCGTAAACTTGAGAGTTTGTCTCTCCATGCAAACTTTCTTGAAGGTAATATCCCTTCCAACATTGGGAATCTCTCTAGTCTTGTGAATTTGACACTCTATGACAACCAGCTCAGTGGTGAAATCCCATTGAGTTTGGGGAATTTAAGGAGGCTTCAAGTTTTCAGAGCAGGAGGGAATAAGAACCTTAAAGGTGAGCTGCCATGGGAGATTGGAAACTGCACCAGCTTGGTCATGTTAGGACTTGCAGAAACCAGCATTTCTGGGAGCCTTCCTTCTTCAATGGGAATGCTGAAGAACATTCAAACCATAGCCATTTACACAACTCTCTTGTCAGGCTCAATTCCAAAGGAGATTGGGAATTGCAGTGAGTTGCAGAAATTGTACTTGTATCAGAACTCTATTTCAGGTCCAATCCCAAGTCAACTTGGAAATCTCAGAAAGCTTCAGAGTATTCTCTTGTGGCAGAACAGTCTTGCAGGGACAATCCCAGAGGAGCTTGGAAGCTGCACAGAGCTCAAAGTCATAGACTTTTCAGTGAATCTCCTCACTGGAAGCATACCAAGGAGCTTTGGGATGCTTTCAAATATTGAAGAAATCCAGCTAAGTGTTAATCAGTTGACAGGTATCATACCTCCTGAGATAACTAATTGCACTTCTCTGACTCAGTTAGAAGTTGACAACAATGCTCTTTCTGGAGAGATTCCCGCTCTTATAGGCAACTTGAAAAGCTTGAACCTGTTCTTTGCATGGCAGAACAAGCTCACTGGGAAAATCCCAGAAAGTCTGTCTCAGTGCCAAGATCTTGAGGCACTTGATCTGTCTTACAACAACCTGATTGGTTCAATACCAAAATCACTTTTTGGGTTGAAGAATCTCACTAAACTCTTGCTTCTTTCCAATGAACTATCAGGCTTTGTTCCCCCTGATATAGGAAACTGCACAAGTCTCTTCAGGTTAAGGTTGAACAGAAACAGATTCTCTGGGTCAATTCCACCTGAGATAGGAAACTTGAAAAACCTCAACTTTATGGATATGAGCAGCAATCACTTTGTGGGGCAGATTCCTTCAACATTATCTGAATGTGAGAGTCTTCAGTTTATTGACCTTCATTCAAATTCTCTCACAGGTTCAATCCCAGAATCTCTCCCTAGAAGTCTTCGATTAATGGATTTCTCAGATAACAGGCTCACTGGTTCACTGACTCGTACCAATATTGGTTCATTAAGTGAACTAACCAAACTCAACCTGGGAAAGAATCAACTCAGTGGGAAAATCCCAGAAGAGATCTCATCTTGCTCTAAGCTTCAGCTTCTTGACCTGGGAAGCAATGAGTTATATGGAGAAATTCCAAAACAATTGGGTCAAATCCCATCATTGGAAATCTCTTTAAATCTCAGCTTCAATCAGTTTTCTGGCCAAATCCCATCTCAAATCTCTGATCTCACAAAACTGGGTGTGCTTGATATCTCCCACAACAACCTCTCAGGGAATCTGAACTCTCTCTCTGACCTGCAAAACCTCGTTTCCTTAAACGTCTCCTTCAACTACTTCTCTGGTGAATTACCCGACACCCCATTTTTCAAAAAGCTGCCTTTAAGTGACCTCACCCCAAATAAAGGCCTCTACATCTCCGGCGCCGATGGTTTGACTCCGGTCGACGGAGTCGGGCCCAGTAAAGTCCATGCCAGATCAGCAATGAAGTTCATCATGTCCATTCTCTTAAGCATAAGTGCAATACTCATACTGCTCACAGTCTATGCCATGGTACGTTCTCACATTCAAAACAGAGCAATCATGGAAGATAATAGCTCATGGGAGATGACTTTTTATCAGAAGCTCGAAATCTCCTCCATCGATGACGTCATCAAGAGCCTGACGTCATCTAACGTGATCGGCACCGGAAGCTCCGGCGTGGTGTACAGGGTAACAATCCCCAACAGCTCAATCGGCGAACTAGCCGTTAAAAAGATGTGGTCTTTAGAAGAATCCGGAGCATTCGAATCCGAGATCCGAACTCTGGGTTTGATCCGACACAAGAACATCGTTAGACTCCTAGGTTGGGGATCCAACAGGAACCTCAAGCTTTTGTTCTACGACTACCTTCCTAACGGCAGCCTCAGCTCGATGCTTCATGGCTCCGGCAAGGGAGGGGCAGATTGGGAAACAAGGTACGAGGTTGTGATGGGTATGGCTCACGCGCTTGCTTATTTACACCACGATTGTGTCCCTCCGATACTGCACGGAGATGTCAAGGCCATGAACGTGTTATTGGATGACAGGTTTCAGGCTTATCTTGCAGATTTCGGATTAGCCAGAATTGTTGGTGATAAAGACGAAGCTCATGATCATCGTTCTGATCCTAAATCACTTCATAAAACCTATCTTGCTGGTTCTTACGGATACATGGCTCCAGAACATGCATCAATGCAGAGAATCACAGAGAAGAGCGATGTGTACAGTTATGGTGTGGTTCTTTTGGAGGTATTGACCGGGAGGCACCCACTAGATCCAACTCTACCAGTTGGTGCACACATGGTTCAGTGGGTTCGGAGCCACTTAGCCAATAAAGGTGACCCATCTGATATTCTGGACTCAAAACTCAGAGGCATGGCTGACCCAGCCATGCACGAGATGCTTCAAACTCTGGCCGTATCATTCCTCTGTGTGAGCACTAAGCCTGAGGATCGTCCTACAATGAAGGACGTTGTGGCCATGCTCAAAGAAATCAGATCTGTTGACTCCTCAAGGTTGGATTCTGATGAACTCAAGAAGAAGGCCAAGTCTTCCTTACACGCCTCGCCCTATCCGCTTCCGCCACCTAAGCAACTCGTCTCGCATCAATCTTCTAACTGTTCCTTTCATTTCTCAGATGACTCAGTCTAA 3351 0.4455 MLGSLRNPSLSPRFSSLLSINSLFFCFFFFFFFSCCYSIDEQGQVLLAWKNNLNSTGDALLASWNPSDSSPCKWVGVGCNSRGEVEEISLKSVDLRGSSLPSKFQALKKSLKVLVLSSTNLTGSIPREIGDCEELVSIDLSGNYLSGEIPVDICRLRKLESLSLHANFLEGNIPSNIGNLSSLVNLTLYDNQLSGEIPLSLGNLRRLQVFRAGGNKNLKGELPWEIGNCTSLVMLGLAETSISGSLPSSMGMLKNIQTIAIYTTLLSGSIPKEIGNCSELQKLYLYQNSISGPIPSQLGNLRKLQSILLWQNSLAGTIPEELGSCTELKVIDFSVNLLTGSIPRSFGMLSNIEEIQLSVNQLTGIIPPEITNCTSLTQLEVDNNALSGEIPALIGNLKSLNLFFAWQNKLTGKIPESLSQCQDLEALDLSYNNLIGSIPKSLFGLKNLTKLLLLSNELSGFVPPDIGNCTSLFRLRLNRNRFSGSIPPEIGNLKNLNFMDMSSNHFVGQIPSTLSECESLQFIDLHSNSLTGSIPESLPRSLRLMDFSDNRLTGSLTRTNIGSLSELTKLNLGKNQLSGKIPEEISSCSKLQLLDLGSNELYGEIPKQLGQIPSLEISLNLSFNQFSGQIPSQISDLTKLGVLDISHNNLSGNLNSLSDLQNLVSLNVSFNYFSGELPDTPFFKKLPLSDLTPNKGLYISGADGLTPVDGVGPSKVHARSAMKFIMSILLSISAILILLTVYAMVRSHIQNRAIMEDNSSWEMTFYQKLEISSIDDVIKSLTSSNVIGTGSSGVVYRVTIPNSSIGELAVKKMWSLEESGAFESEIRTLGLIRHKNIVRLLGWGSNRNLKLLFYDYLPNGSLSSMLHGSGKGGADWETRYEVVMGMAHALAYLHHDCVPPILHGDVKAMNVLLDDRFQAYLADFGLARIVGDKDEAHDHRSDPKSLHKTYLAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGRHPLDPTLPVGAHMVQWVRSHLANKGDPSDILDSKLRGMADPAMHEMLQTLAVSFLCVSTKPEDRPTMKDVVAMLKEIRSVDSSRLDSDELKKKAKSSLHASPYPLPPPKQLVSHQSSNCSFHFSDDSV 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1123 1116 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 857 1080 - -
Acco10g1123 1116 SUPERFAMILY L domain-like 39 315 - -
Acco10g1123 1116 Gene3D Ribonuclease Inhibitor 438 538 IPR032675 -
Acco10g1123 1116 Gene3D Ribonuclease Inhibitor 618 702 IPR032675 -
Acco10g1123 1116 SUPERFAMILY Protein kinase-like (PK-like) 764 1062 IPR011009 -
Acco10g1123 1116 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 541 1063 - -
Acco10g1123 1116 FunFam Leucine-rich receptor-like protein kinase family protein 344 617 - -
Acco10g1123 1116 SMART LRR_typ_2 445 469 IPR003591 -
Acco10g1123 1116 SMART LRR_typ_2 349 373 IPR003591 -
Acco10g1123 1116 SMART LRR_typ_2 493 517 IPR003591 -
Acco10g1123 1116 SMART LRR_typ_2 564 588 IPR003591 -
Acco10g1123 1116 SMART LRR_typ_2 301 325 IPR003591 -
Acco10g1123 1116 SMART LRR_typ_2 637 660 IPR003591 -
Acco10g1123 1116 SMART LRR_typ_2 156 180 IPR003591 -
Acco10g1123 1116 ProSiteProfiles Protein kinase domain profile. 781 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1123 1116 Gene3D Phosphorylase Kinase; domain 1 742 856 - -
Acco10g1123 1116 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 216 341 - -
Acco10g1123 1116 Pfam Protein kinase domain 784 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1123 1116 Gene3D Ribonuclease Inhibitor 217 437 IPR032675 -
Acco10g1123 1116 Gene3D Ribonuclease Inhibitor 36 216 IPR032675 -
Acco10g1123 1116 ProSitePatterns Protein kinases ATP-binding region signature. 787 812 IPR017441 GO:0005524
Acco10g1123 1116 MobiDBLite consensus disorder prediction 1071 1104 - -
Acco10g1123 1116 ProSitePatterns Serine/Threonine protein kinases active-site signature. 901 913 IPR008271 GO:0004672|GO:0006468
Acco10g1123 1116 Pfam Leucine rich repeat N-terminal domain 40 80 IPR013210 -
Acco10g1123 1116 Gene3D Transferase(Phosphotransferase) domain 1 857 1088 - -
Acco10g1123 1116 ProSiteProfiles Leucine-rich repeat profile. 639 661 IPR001611 GO:0005515
Acco10g1123 1116 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Acco10g1123 1116 FunFam Leucine-rich receptor-like protein kinase family protein 39 203 - -
Acco10g1123 1116 SMART serkin_6 781 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1123 1116 Gene3D Ribonuclease Inhibitor 539 617 IPR032675 -
Acco10g1123 1116 FunFam Putative LRR receptor-like serine/threonine-protein kinase 618 703 - -
Acco10g1123 1116 SUPERFAMILY RNI-like 294 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1123 Acco-ChrAcco10 25148252 25152378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1123 36 1116 Receptor kinase-like Gene Family AT5G56040 66.144 0.0 1400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco10g1123 Pkinase 2.7e-35 CL0016