Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1113 ATGAAAAACATGAGGAAGTCAAGTAGTGTTAAATTAGCTATTTCCTCGTTACTCATAGTGATAATATTAACAGCAACTACTGTAGGGGCTCTTTTGCCGAATAAGAGTTACATTGAGTGGGAAGACTTTGTGGTAACAAATGATGACTCGAGAATGGGCAGAGTCATCACCGTTGATCAGACCGGAGCCGGCAATTCCACCACCATCCAAGGCGCCGTTGATCGCATTCCTGATAGCTACGAAGCCAGAATCAAAATCGTCATTAATCCTGGAACTTACAGGGAAATCGTAAGGGTACCACAAAGCAAGCCACACATATCATTCATAGGAAAGCCAGGAACAGATGGCTGCTTCCCTTTGATCCAAGGTTCTCGAAAGGCTTCTGATAAAGATAAGAATGGCACTGAAATCGCAAGCGTTGATACCCACATTCTGCTAGTTCAATCTGACTACTTTGTTGCCAACGGTATTAGTATCGAGAATAACGCGGTTCCAACTGGATATAAGGATCAAGCAGTAGCAGTTAGGGTTGACAGTGACAAGGCAATGTTCTATAGAGTGAAGTTCTTAGGGAATCAAGACACACTTCTTGATAACACAGGAACTCATTTCTTCTATCAATGTTACATTGAAGGAACGGTTGATTTCATCTGGGGCCATGCAACCTCATTATTTGAGGGTTGTACAATACACTCAAAAAGATGGGGATCAATAGCAGCCCAGGCAAGGAGGGGAGAAGACGAGACGGGATTCGTTTTTTTAGGGTGCAAGATTGAAGGAAGTGGGCCGACTCTTCTTGGGCGGGCTTACGGCCCATATTCTAGAACCATCTTCTCCTTCTGCACTATGGACTATGCCATTAGCCCCGCCGGCTGGGGTAACATGGACGGCAATCCTTCCCAAGAAAGTAATGCATATTTCGGGGAGTATATGAACGAGGGAGCTGGATCAAATAGAAGTGGGAGGGTTTCGTGGTCTAAAGCTTTAACGGACGATGAAGCATTGGGATTTGTTGGCAGAACCTTTATCAACGGATCAGATTGGCTACGAATATGA 1056 0.446 MKNMRKSSSVKLAISSLLIVIILTATTVGALLPNKSYIEWEDFVVTNDDSRMGRVITVDQTGAGNSTTIQGAVDRIPDSYEARIKIVINPGTYREIVRVPQSKPHISFIGKPGTDGCFPLIQGSRKASDKDKNGTEIASVDTHILLVQSDYFVANGISIENNAVPTGYKDQAVAVRVDSDKAMFYRVKFLGNQDTLLDNTGTHFFYQCYIEGTVDFIWGHATSLFEGCTIHSKRWGSIAAQARRGEDETGFVFLGCKIEGSGPTLLGRAYGPYSRTIFSFCTMDYAISPAGWGNMDGNPSQESNAYFGEYMNEGAGSNRSGRVSWSKALTDDEALGFVGRTFINGSDWLRI 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1113 351 Pfam Pectinesterase 56 345 IPR000070 GO:0030599|GO:0042545
Acco10g1113 351 Gene3D - 49 351 IPR012334 -
Acco10g1113 351 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 49 350 - -
Acco10g1113 351 SUPERFAMILY Pectin lyase-like 52 350 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1113 Acco-ChrAcco10 25082872 25085161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1113 12 294 Carbohydrate Esterase AT5G55590 44.409 7.23e-80 245