Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1112 ATGAAGCTATCTACACTATTCGGACTGTTGCTCCTATCACTCATAGCGGCCACAGCCACTGCCAGGGTCGGTCCGGCCGCCTCCGTGAGAGATGTTGGCCAGCCTAATGCAAATTTCATCTCGTGGAGAGACTTGACAGTGAGACGAAGCGACATGATGAGAAATGGTAGAGTTATTGTAGTTGATCAAAATGGACGTGGAAATTCAACCACAGTTCAAGGTGCCGTTGATTTGGTCCCTGTTAACAACCCATCACGAATCAAAATCATTGTTTATCCTGGAACCTACAATGAATTAGTGGAAATACCACCAAGCAAGCCTTATATATCAATTATTGGGAGGCCACATGCGGTAACTGGTGAGTTTCCTGTGATCACGAGTTCTCGAAAAGCTTCTGATAAAGATCAGAAGGGCAACATGTGGGGAACCATGAGTACTGCCACTGTTCTCGTTCAATCTGACTATTTTGTGATGGCCTCACTTACCATCGAGAATACTGCGATTCCAAGTGCTGGATATGGAGATGGAAATCAGGCACTGGCGATAAGGATAGATGGAGATAAATCAGTGTTCTACAGAACCAAGTTCTTAGGGTTTCAGGATACTGTTATGGATAACGTTGGGACCCACTTCTTTTATCATTGTTATATTGAAGGAAGCGTTGATTTCATCTGTGGAAGTGCTACATCATTGTACCAGGGCTGTACATTTCATTCAAAAAGTGGAGGAGCAATAGCTGCACACCAGAGAAATAGTGAGGACAATTCAGGTTTTATCTTTGAGGATTGCAAAATTACGGGGGATGGACCCACCTTTCTTGGGAGAGCTTGGGGCAATTATTCTAGAATTATATACTCCTTTTGCACAATGGACAATATTATCTACCCTCAAGGCTGGAACGATTGGGGCAATTCTTACAAACAAAGGACTGCGTTTTTTGGGGAGTACATGAACAAAGGACCTGGAGCAGACACTGGAGGAAGGGCTTTATGGTCAAAAGCATTGTCAGATGGTCAGGCAACAAGATTTGTTGGTAGAAGCTTCATTAATTCAGACCAATGGCTTAAAATACAATTAATTGAGAGGAGGTCAAAATCTTCTCCTGATAGGTTATAA 1116 0.4301 MKLSTLFGLLLLSLIAATATARVGPAASVRDVGQPNANFISWRDLTVRRSDMMRNGRVIVVDQNGRGNSTTVQGAVDLVPVNNPSRIKIIVYPGTYNELVEIPPSKPYISIIGRPHAVTGEFPVITSSRKASDKDQKGNMWGTMSTATVLVQSDYFVMASLTIENTAIPSAGYGDGNQALAIRIDGDKSVFYRTKFLGFQDTVMDNVGTHFFYHCYIEGSVDFICGSATSLYQGCTFHSKSGGAIAAHQRNSEDNSGFIFEDCKITGDGPTFLGRAWGNYSRIIYSFCTMDNIIYPQGWNDWGNSYKQRTAFFGEYMNKGPGADTGGRALWSKALSDGQATRFVGRSFINSDQWLKIQLIERRSKSSPDRL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1112 371 SUPERFAMILY Pectin lyase-like 56 358 IPR011050 -
Acco10g1112 371 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 51 356 - -
Acco10g1112 371 Pfam Pectinesterase 59 351 IPR000070 GO:0030599|GO:0042545
Acco10g1112 371 Gene3D - 54 364 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1112 Acco-ChrAcco10 25075444 25077400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1112 3 309 Carbohydrate Esterase AT5G55590 45.808 3.79e-89 270