Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1109 ATGGAAATCAGGAGGGAGAATGGTGATGGTAATGGTGATTCTCAGGAGATTACTTTGCAGATTGCAGCAGCAAGCAATAGCTTTGGTCACGGCATAGAGTTGATGTCTAAGCCTCCTTACCTTACCAATAGTAACATCAATAACAACAACAGGTTCTCTCATATTGACATTCTGGTTGATCATTCCACTATGAACAGGGATCGTCCTGTCCCCATCTTTCTCAAGTTTGAGGATGTAGAGTACAAGGTGAGGAACAGCCACGCAGTGTCCAGGTTGAAGAAAAGGGTGTCAAAGTTGGCCACACAAGTCAGTGAAAGCCAAGACAGATACAAAAAAATCTTGAAGGGTATGACTGGAAGCATAGGTCCTGGTGAGATCCTTGCTCTCATGGGTCCTTCTGGCAGTGGCAAGACAACCTTGTTGAAAGTCATCGGAGGAAGATTAAGCGACAATGTCAAAGGAAAAGTTAGTTACAATGATGTTGGATACAATTCCGCTATCAAGAGAAGGATTGGATTTGTGACACAAGATGATGTTCTGTTCCCACAACTAACAGTAGAAGAAACATTAGTCTACTCTGCATTGTTAAGGTTGCCATCCAACATGAGCCTACAACAGAAACATCAGAGAGTGGAGGCAACTCTAAAGGATCTAGGCCTTGAAGGATGTAGGAACACAAAAATAGGAGGAGGATTCATCAAAGGCATATCAGGAGGGGAAAGGAAGAGAACCAGCATAGGGCATGAGATTCTTGTGGATCCTTCACTGCTTCTACTTGATGAGCCAACCTCAGGCCTTGATTCCTCTTCAGCAAACCGACTCCTTCTCACTCTTCATGGACTTGCCAAGGCCGGAAGGACAATAATCACAACAATTCACCAGCCATCCAGCAGGATCTTTCACATGTTTGACAAACTTCTTCTGATATCAGAAGGCCATCCAATTTATTATGGGAAGGCTATAGATTCAATGGACTATTTCTCATCCTTGAGGTTCATCCCAGACATACCCATGAATCCTGCAGAATTCTTGCTTGACTTAGCCACTGGACAAGTGAATGACATAAGCATTCCTGAAGACATTTTGGAACATCAGGAATCTAATGACCCTTCAAAAGTTGTCATAAAACATCTACAACTCAAGTACAAGACTTTACAGGAGCCAAAGGAGAAAGAAGAGAACCATGGAGCAATGAAGGCACCGGAAAATCTACAAGTAGCCATTCAAGCTAAGAAGGAGTACACATTAAGTTGGATAGACCAGTTCATGATTCTGTCAAAGAGAACATTCAAAACAAGATGCAAAGACTACTTCGATAAGGTCAGACTAATTCAGGCACTTGGAGTTGCGGTCTTACTGGGCCTTCTTTGGTGGCAATCTTCAACCCACACAGAGGCTCAACTCAGAGATCAGGTGGGGTTGATGTTCTATATCTGTATATTCTGGACATCTTCATGTATCTTTGGAGCAGTCTATGTGTTTCCATTTGAAAAGATGTATTTGGTGAAGGAAAGGAAAGCAGACATGTACAGATTAAGTGTATACTATGCATGCAGCACTCTGTGTGATATGATAGCTCATGTGTTTTACCCAACTTTTTTCATGTTCATCGTGTACTTCATGGCTGGCTTCGAGAGAACTCTCACTGCCTTCTCCCTCACACTACTCTCTGTGCTTCTGATAGCCATTACCAGTCAAGGAGCAGGAGAATTATTTGGAGCTGCAATTATGAGTATTCAAAAATCTGGCATGGTTGCTTCTTTGATCCTAATGTTGTTTCTTCTCACCGGCGGCTACTATGTCCAGCACATACCAGTGTTCATGAGGTGGTTGAAGTATTTGTCGTTCATGTACTATGGGTTCAGGCTGCTGCTAAAAGTGCAGTACTCGGGAGATGAACTTTATGAATGTGAAAGCTTTGGAGGGTGCAGGACTCTGCAGAGCTCTCCTTCGTTCGACACAGTGAACTTGGAAGGAGGTTTGCAAGAAGTTTGGGTTCTTCTCGCCATGGCTCTCACCTTTCGCCTCTTTGCTTACTTGTGCCTCCGCTCCAAAATTGAGGCCTCCACCCTCTGA 2076 0.435 MEIRRENGDGNGDSQEITLQIAAASNSFGHGIELMSKPPYLTNSNINNNNRFSHIDILVDHSTMNRDRPVPIFLKFEDVEYKVRNSHAVSRLKKRVSKLATQVSESQDRYKKILKGMTGSIGPGEILALMGPSGSGKTTLLKVIGGRLSDNVKGKVSYNDVGYNSAIKRRIGFVTQDDVLFPQLTVEETLVYSALLRLPSNMSLQQKHQRVEATLKDLGLEGCRNTKIGGGFIKGISGGERKRTSIGHEILVDPSLLLLDEPTSGLDSSSANRLLLTLHGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGHPIYYGKAIDSMDYFSSLRFIPDIPMNPAEFLLDLATGQVNDISIPEDILEHQESNDPSKVVIKHLQLKYKTLQEPKEKEENHGAMKAPENLQVAIQAKKEYTLSWIDQFMILSKRTFKTRCKDYFDKVRLIQALGVAVLLGLLWWQSSTHTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKMYLVKERKADMYRLSVYYACSTLCDMIAHVFYPTFFMFIVYFMAGFERTLTAFSLTLLSVLLIAITSQGAGELFGAAIMSIQKSGMVASLILMLFLLTGGYYVQHIPVFMRWLKYLSFMYYGFRLLLKVQYSGDELYECESFGGCRTLQSSPSFDTVNLEGGLQEVWVLLAMALTFRLFAYLCLRSKIEASTL 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1109 691 Coils Coil 89 109 - -
Acco10g1109 691 SMART AAA_5 123 313 IPR003593 GO:0016887
Acco10g1109 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 328 IPR027417 -
Acco10g1109 691 Pfam ABC-2 type transporter 421 629 IPR013525 GO:0016020|GO:0140359
Acco10g1109 691 Gene3D - 95 329 IPR027417 -
Acco10g1109 691 CDD ABCG_EPDR 110 318 - -
Acco10g1109 691 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 53 679 - -
Acco10g1109 691 FunFam ABC transporter G family member 22 101 330 - -
Acco10g1109 691 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 74 336 IPR003439 GO:0005524
Acco10g1109 691 Pfam ABC transporter 114 264 IPR003439 GO:0005524
Acco10g1109 691 Coils Coil 201 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1109 Acco-ChrAcco10 25041878 25046361 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1109 112 297 Calmodulin-binding Proteins AT2G36910 29.688 1.09e-11 66.6