Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1081 ATGGGCGCAGCCAACCCAGTCGGACACGGCGGAGCTCCAGTGAATCCAAACCAGATTCAGCCACAGCGCGTGATGATGAGAGAGCAGGACCAGTACATGCCGGTGGCGAACGTCATCAGGATCATGCGACGGATCCTTCCACCTCACGCTAAGATCTCAGACGAAGCCAAAGAGACGATCCAGGAGTGTGTCTCTGAGTACATAAGCTTCATCACCAGCGAGGCTAACCAGCGGTGCCAGCAAGAACAGCGCAAGACGGTGACGGCGGATGACTTGCTGTGGGCCATGGAGAAGCTCGGTTTTGACGACTACGTGGGCCCTCTCTCTTTCTACCTCCAGCGTTACCGTAACGGTGACGGTGGTTCCGGCGGTGGCCACTATGCCCAACGGCCACAGCAAGTACCAGCACCACTGGAGCCCGCACCAGTAGTAATGCAACCGCCACCTCCGCAGCCATCGTACTATTACGGGTCGGGTTATAATTATCCGGTGGGGCCGAACCAGATGGGGTCTGGTGCAGGTAGCTCAAGTGGTACTGATGGCGGCGGTCCGGCGTATTATGATCCATTTGGTCACCTGAGAAATGACCGTCTCTGA 597 0.5729 MGAANPVGHGGAPVNPNQIQPQRVMMREQDQYMPVANVIRIMRRILPPHAKISDEAKETIQECVSEYISFITSEANQRCQQEQRKTVTADDLLWAMEKLGFDDYVGPLSFYLQRYRNGDGGSGGGHYAQRPQQVPAPLEPAPVVMQPPPPQPSYYYGSGYNYPVGPNQMGSGAGSSSGTDGGGPAYYDPFGHLRNDRL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1081 198 Gene3D Histone, subunit A 22 133 IPR009072 GO:0046982
Acco10g1081 198 PRINTS CCAAT-binding transcription factor subunit A signature 79 97 - -
Acco10g1081 198 PRINTS CCAAT-binding transcription factor subunit A signature 98 116 - -
Acco10g1081 198 PRINTS CCAAT-binding transcription factor subunit A signature 60 78 - -
Acco10g1081 198 SUPERFAMILY Histone-fold 29 124 IPR009072 GO:0046982
Acco10g1081 198 MobiDBLite consensus disorder prediction 166 198 - -
Acco10g1081 198 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 22 121 IPR027113 GO:0001228|GO:0006355|GO:0016602
Acco10g1081 198 FunFam Nuclear transcription factor Y subunit B-6 21 134 - -
Acco10g1081 198 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 33 96 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1081 Acco-ChrAcco10 24760409 24761005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1081 22 123 CCAAT-HAP3 Transcription Factor Family AT5G47670 72.549 1.02e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Acco10g1081 CBFD_NFYB_HMF 1.2e-24 CL0012