Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1077 ATGGGTGTGGACTATTACAAGATCTTGCAGGTCGACAAGAATGCCAAAGACGACGACTTGAAGAAGGCTTACAGGAAGCTTGCCATGAAATGGCATCCTGATAAGAACCCCGATAACAAGAAAGAAGCTGAAGCTAAATTCAAGCAAATTTCTGAAGCCTACGATGTTCTGAGTGATCCACAAAAGAGAGCCGTCTATGATCAGTATGGTGAAGAGGGTCTGAAGGGTGGGGTTCCGCCTCCCGATGCCGGAGGGGCTTCTTTCTTTCCAACTGGAGAAGGAACGACATCGTTTAGTAGTGGCTATGGAGGGATGAGGTCGAGGTTCTCTAGTGGGATTTTTGGCGATGATATGTTCGGATCATTCGGAGATGCAAGAGGGGGAGTCCATATGAGTCCAGGTGGTCCTCGAAAAGCTCCTCCTATTGAGAACAGATTGCCCTGTAGTCTCGAAAAATTGTACCAGGGAACTACAAAGAAGATGAAGATCTCCAGAGAAATCGCTGATGCTAGTGGGTAA 519 0.4721 MGVDYYKILQVDKNAKDDDLKKAYRKLAMKWHPDKNPDNKKEAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGGVPPPDAGGASFFPTGEGTTSFSSGYGGMRSRFSSGIFGDDMFGSFGDARGGVHMSPGGPRKAPPIENRLPCSLEKLYQGTTKKMKISREIADASG 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1077 172 SMART dnaj_3 3 62 IPR001623 -
Acco10g1077 172 Gene3D - 131 171 - -
Acco10g1077 172 PRINTS DnaJ domain signature 42 62 IPR001623 -
Acco10g1077 172 PRINTS DnaJ domain signature 6 24 IPR001623 -
Acco10g1077 172 PRINTS DnaJ domain signature 62 81 IPR001623 -
Acco10g1077 172 PRINTS DnaJ domain signature 24 39 IPR001623 -
Acco10g1077 172 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 171 - -
Acco10g1077 172 CDD DnaJ 4 59 IPR001623 -
Acco10g1077 172 Gene3D DnaJ domain 3 127 IPR036869 -
Acco10g1077 172 MobiDBLite consensus disorder prediction 71 90 - -
Acco10g1077 172 Pfam DnaJ domain 4 67 IPR001623 -
Acco10g1077 172 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Acco10g1077 172 FunFam DnaJ subfamily B member 13 3 127 - -
Acco10g1077 172 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Acco10g1077 172 SUPERFAMILY Chaperone J-domain 3 104 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1077 Acco-ChrAcco10 24656481 24657185 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1077 5 74 C2H2 Transcription Factor Family AT1G74250 37.838 4.65e-11 58.5