Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1062 ATGGGGCTATCTGAAGTTTCAATCTTGGTTTTCTGGGTTTGTGTCCAGTTGCATTTAGCTCAAGTTCTCTCATCCTTCGACCAAAACCAAGTCAGTAATTACATTAGCTGGAAAGATTTGTGGGTTGATGATCAGAGATTTCCCTGGGACCCCATTACAGGTGATCGAGTTATTGTCGTTGACCAGCATGGCAGAGGACATTCTAGGACTGTACAAGGAGCTGTAGATATGGTTCCTGATAACAACTCAGAAAGAATCAAAATTTACATATACCCAGGAATTTACAGAGAGAAAGTGTATGTGCCAAGAACGAAGGGGTATGTGTCGATGATAGGAGGACGAAATGGAAGAGAGAGTGCAGTGATTACGTGGAACAGCAAATCATCGGACGTAGGTTTTGATGGACAAGAACTTGGGACCTATAATTCTGCAACTGTGACTGTAGAATCTGATTATTTCTGTGCAACCAGGCTCACCTTTGAGAATTCGGTAGAGACGGTGAGCGGGGGAGATGGGATGCAAGGAGTGGCACTGAGGGTGGACAGTGAAAGGGCCATGTTTTATAGGGTGAGGATCAAAGGGGAACAAGACACACTGTTGGACAACACGGGAACTCATTATTTCTATCAGTGTCAAATCCAAGGCAAAATTGATTTCATATTTGGCAATTCAAAATCACTCTATCAGAACTGTGATCTTCATTCAGTAGCAGAGACATATGGAGCAATAGCAGCACATCACAGGGATGCAGAAAATGAAGACACAGGCTTCTCTTTTGTAAATTGCTCTATTACAGGCACGGGCAGTGTGTACCTTGGCAGAGCCTGGGGTGACTATTCCAGAATCATCTATTCTCTCTGCTACATGGATGATATCATCGTCCCTGAAGGATGGACTGATTGGAACCACACTTCTAGACAAATGACCGCTGTTTTTGGGGAGTACCAGTGTGAGGGAATTGGAGCAGATAGGAGGGGGAGGGTGAAATGGTCAAAATCTTTGAGCTATGAGGAAGCAAGGCCTTTTCTGGATAGGAGTTTCATAAATGGGGACCAGTGGCTTAATCTATAG 1071 0.4416 MGLSEVSILVFWVCVQLHLAQVLSSFDQNQVSNYISWKDLWVDDQRFPWDPITGDRVIVVDQHGRGHSRTVQGAVDMVPDNNSERIKIYIYPGIYREKVYVPRTKGYVSMIGGRNGRESAVITWNSKSSDVGFDGQELGTYNSATVTVESDYFCATRLTFENSVETVSGGDGMQGVALRVDSERAMFYRVRIKGEQDTLLDNTGTHYFYQCQIQGKIDFIFGNSKSLYQNCDLHSVAETYGAIAAHHRDAENEDTGFSFVNCSITGTGSVYLGRAWGDYSRIIYSLCYMDDIIVPEGWTDWNHTSRQMTAVFGEYQCEGIGADRRGRVKWSKSLSYEEARPFLDRSFINGDQWLNL 356
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1062 356 Gene3D - 56 356 IPR012334 -
Acco10g1062 356 Pfam Pectinesterase 58 351 IPR000070 GO:0030599|GO:0042545
Acco10g1062 356 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 54 355 - -
Acco10g1062 356 FunFam Pectinesterase 53 356 - -
Acco10g1062 356 SUPERFAMILY Pectin lyase-like 55 355 IPR011050 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco10g1062 Acco-ChrAcco10 24499218 24501565 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1062 3 307 Carbohydrate Esterase AT5G55590 55.385 1.35e-128 370