Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1041 ATGGAAACTTCTGCGAAACCTTCCTATGGGTCCGGAAGGTTCTATCTTGAGCACCAAGACTATAACTCATCTGATAACACCAGCCAAGCAACAACTTACTCCTCAGTTCAGACTTTAGAACAACATTACACCCTAGAATCTTCCTCAAGAACAAACAGTTTTCCAAACCATAATAATTCTCCATCCACTGCCAATTTCTCGCCTAATGACAGCCCTGCATCACAGCTGGAGTCAAATTCTTACGCTCTAATGTCTCAACACTCACTCGAAATCATCAATGGATCGTTTGAGAATGACTCTTGCTTGACAAATGACTTCGATGACTTGAGCCTTGTGATGAGAGAGTTCGAGACTGCTATGCAGGGACCTGATACAGAAATTCCGGGGATGTATGATACTCTAGTTCCTTTGGAATCTAATAAGGTTTTGTCAGAGGCAGAAAAGTGGAAGCTAACAATGGACATAGTATCTAGAGGGGATTTGAAAGAGATGCTTTTTGCTTGTGCAAAAGCGATAGATGCAAATGATATGGAGACAACTACATATTTGATGTCTGAGACGCGGAAAGTGGTTTCCATTTCAGGCAACCCAGTCCAACGAATAGGAGCTTATATGTTGGAATCTCTGGTGGCAAGGATGGCCTGTTCTGGAAGTGCAATCTACAAGGCCTTGAAATGCAAGGAGCCTACCGGTAATGAACTCCTTTCCTACATGCACTTGCTGTATGAAATCTGCCCATACTTCAAGTTTGGGTATCTGTCTGCAAATGGGGCGATTGCTGAAGCCATGAAGGAAGAAAATAGGATCCATATTATTGATTTTCAGATTAACCAGGGCAGCCAGTGGATAAGCCTGATCCAGGCTCTTGCTGGACGACCAGGTGGGCCCCCAGAGCTCAGAATAACTGGTTTTGATGACTCTGCTTCGAATTTTGCTCGTGGAGGGGGCCTTGACATTGTGGGGAAAAGACTAACAAGACTTGCAGAATCATGTCAGGTTCCCTTTGAGTTCCATGCTGCTGGAGTTGCTCCTTCAAAGGCACAACTCCAAGACCTTAAGCTTCAATCTGGCGAAGCTATTGCTGTAAATTTTGCTATGATGCTGCACCATATACCAGATGAGAGCGTGGACAGTCACAATCCTCGTGACCGGTTACTGAGATTCGCAAAGCGCTTGTGCCCAAAAGTAGTGACTCTTGTGGAGCAGGAATCCAACACCAACCGTGTCCCATTCTTCACCCGTTTCACTGAGACACTGAACTATTACTTGCCTGTTTTCGAGTCAATTGATGCAGTTCTGCCAAGGGAGCAAAAGGAGAGGATCAATGTGGAACAACACTGTCTAGCTCGAGAACTTGTCAACTTAGTTGCATGTGAAGGAGCAGAAAGGGTGGAACGCCATGAGCCTTTGAAGGTGTGGAGGTCGCGCTGTGCCATGGCTGGATTGGAGCCGTATCCATTGAGCTCCTTTGTGAATTCTACCATCAAGAATCTGCTGGAGCAGTACTGTGGAAATTATACTCTAGAAGAGAGAGATGGGGCACTGTACCTTGGTTGGATGAATCAACCTCTTGTTGCCTCTTGTGCTTGGAGGTGA 1596 0.4555 METSAKPSYGSGRFYLEHQDYNSSDNTSQATTYSSVQTLEQHYTLESSSRTNSFPNHNNSPSTANFSPNDSPASQLESNSYALMSQHSLEIINGSFENDSCLTNDFDDLSLVMREFETAMQGPDTEIPGMYDTLVPLESNKVLSEAEKWKLTMDIVSRGDLKEMLFACAKAIDANDMETTTYLMSETRKVVSISGNPVQRIGAYMLESLVARMACSGSAIYKALKCKEPTGNELLSYMHLLYEICPYFKFGYLSANGAIAEAMKEENRIHIIDFQINQGSQWISLIQALAGRPGGPPELRITGFDDSASNFARGGGLDIVGKRLTRLAESCQVPFEFHAAGVAPSKAQLQDLKLQSGEAIAVNFAMMLHHIPDESVDSHNPRDRLLRFAKRLCPKVVTLVEQESNTNRVPFFTRFTETLNYYLPVFESIDAVLPREQKERINVEQHCLARELVNLVACEGAERVERHEPLKVWRSRCAMAGLEPYPLSSFVNSTIKNLLEQYCGNYTLEERDGALYLGWMNQPLVASCAWR 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1041 531 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 88 525 IPR005202 -
Acco10g1041 531 MobiDBLite consensus disorder prediction 1 76 - -
Acco10g1041 531 MobiDBLite consensus disorder prediction 17 76 - -
Acco10g1041 531 ProSiteProfiles GRAS family profile. 152 531 IPR005202 -
Acco10g1041 531 Pfam GRAS domain family 161 531 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1041 Acco-ChrAcco10 24254910 24256505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1041 35 531 GRAS Transcription Factor Family AT1G50600 58.483 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco10g1041 GRAS 8.9e-128 CL0063