Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1008 ATGAATTCTCGCCTTCTTAAAAGGACAATGGCATCATCTTCAGACTCATGGATGAAGGAATATAACGAAGCCGTCAAACTTGCTGATGATATCAGTGGCATGATTTCTGAACGGAATTCATTTCCTACATCTGGACCTGAAACCCAGCGACATGCGTCTGCTATAAGAAGGAAGATAACAATATTAGGGACCAGACTTGATAGCTTGCAATCCCTTTTGACAAAGCTTCCTGGGAAACAGCCTATATCTGACAAGGAGCTGAATCGGCGCAGGGACATGATTGCAAATTTAAGGTCAAAAGTTAACCAAATGGCATCAGCATTGAATATGTCTAACTTTGCAAACAGGGATAGTTTGCTTGGACCAGATACGAAACAACCTGATGCGATGAGCAGAACAGTCGGCTTGGATAACAGTGGACTTGTTGGACTTCAACGGCAAGTTATGAGAGAGCAAGATGAGGGCCTTGAGAAATTGGAGCAGACTGTAACAAGTACGAAACATATTGCATTGGCTGTAAATGAAGAACTGGATTTACACACTAGACTCATTGATGACTTGGACCAGCATGTAGATGTTACAGATTCTCGGCTGCGGAGGGTGCAGAAGAACTTGGCAATTTTGAATAAGCGTACCAAGGGTGGTTGCTCCTGCCTGTGTTTGCTTTTATCAGTTGTTGGTATAGTGGCTTTGGTTGCTGTTATATTTCTGTTGGTCAAATATTTGTAA 729 0.4239 MNSRLLKRTMASSSDSWMKEYNEAVKLADDISGMISERNSFPTSGPETQRHASAIRRKITILGTRLDSLQSLLTKLPGKQPISDKELNRRRDMIANLRSKVNQMASALNMSNFANRDSLLGPDTKQPDAMSRTVGLDNSGLVGLQRQVMREQDEGLEKLEQTVTSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRTKGGCSCLCLLLSVVGIVALVAVIFLLVKYL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1008 242 CDD SNARE_Qc 149 206 - -
Acco10g1008 242 FunFam syntaxin-51 isoform X2 148 210 - -
Acco10g1008 242 Gene3D - 147 210 - -
Acco10g1008 242 PANTHER SYNTAXIN 40 226 IPR045242 -
Acco10g1008 242 SUPERFAMILY SNARE fusion complex 137 207 - -
Acco10g1008 242 SUPERFAMILY t-snare proteins 35 109 IPR010989 GO:0016020|GO:0016192
Acco10g1008 242 Pfam SNARE domain 183 233 IPR000727 -
Acco10g1008 242 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 146 208 IPR000727 -
Acco10g1008 242 SMART tSNARE_6 141 208 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1008 Acco-ChrAcco10 23966044 23968951 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1008 10 242 SNARE and Associated Proteins AT1G16240 72.961 1.09e-126 356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1008 10 23966044 23968951 Acco10g1008 10 23966044 23968951 ECH