Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0973 ATGAGGAGAGTTAGAGGAGCTGCCGCTGTTAAACAGGCGGCGGCGATGACGGCGGCGGTTGAACTCAATGGATCCGGTTCAGGGGCGGTTTTAAAAGAGCCTAGGTACCGGGGCGTGAGGAAGAGACCTTGGGGTAGATTCGCTGCCGAGATCAGAGACCCTTTGAAGAAAGCTCGTGTCTGGCTAGGCACCTTTGACTCCGCCGAGGAAGCGGCTCGAGCCTACGATGCTGCGGCGATAGCCCTCCGTGGACCCAAGGCCAAGACCAATTTCCCTATCTCTCCTTCATTTTCGCCGTTTTGTTATCCCACCACCAACCCTAACGTCAACGACGACGTTTTGGATCACCGGTTGTACGCGAACAACGGTCTCCAGGAGCACCAGATTAACCCTCAGAGACCAGCCACCAGCAGCATGAGTAGCACGTCCTTTAGCGGCCCACGGGCACCGTTAACGGCGGTGGCCACGGCAGCAGTAAACCGGAGACATCCCCGGACACCGCCGGTCATGCCGGATGATTGCCACAGTGATTGCGATTCCTCGTCATCAGTGATCGATGGGGACGGAGACGTGGAGGTCGCCGATTTCGCCTCATCGTCGTTCCGTCAACCGTTGCCTTTCGATCTCAACTTCCCACCGTTGGATGCCGCTAACATGGCGGCGGACGATCTTCACTGCACCGCTCTCTGCCTCTGA 696 0.5805 MRRVRGAAAVKQAAAMTAAVELNGSGSGAVLKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSAEEAARAYDAAAIALRGPKAKTNFPISPSFSPFCYPTTNPNVNDDVLDHRLYANNGLQEHQINPQRPATSSMSSTSFSGPRAPLTAVATAAVNRRHPRTPPVMPDDCHSDCDSSSSVIDGDGDVEVADFASSSFRQPLPFDLNFPPLDAANMAADDLHCTALCL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0973 231 FunFam Ethylene-responsive transcription factor 2 35 93 - -
Acco10g0973 231 SUPERFAMILY DNA-binding domain 35 94 IPR016177 GO:0003677
Acco10g0973 231 Gene3D AP2/ERF domain 35 94 IPR036955 GO:0003700|GO:0006355
Acco10g0973 231 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Acco10g0973 231 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
Acco10g0973 231 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Acco10g0973 231 Pfam AP2 domain 34 84 IPR001471 GO:0003700|GO:0006355
Acco10g0973 231 CDD AP2 34 94 IPR001471 GO:0003700|GO:0006355
Acco10g0973 231 MobiDBLite consensus disorder prediction 163 182 - -
Acco10g0973 231 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Acco10g0973 231 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 24 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0973 Acco-ChrAcco10 23668418 23669113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0973 1 231 AP2-EREBP Transcription Factor Family AT3G20310 55.094 9.72e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco10g0973 AP2 7.8e-16 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g0973 10 23668418 23669113 Acco10g0973 10 23668418 23669113 ECH