Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0959 ATGAAAGTGTTGGAGAACTGTGGTCTTCATCCAACAATTGGTATCAATGTTCTTATTGAAAAATCATTACTAAGTTACATTTCTTTTAAAAAAGGTGATCGCCTTTTGTCTATGCATAATTTGCTTCAAGAAATGGGAAAGAACATTGTCTTGCAAGAATCTCCAAATGATGCAAGCAGAAGAAGCAGGTTGTGGTCTCAAGAAGAAATAGATCAAGTGTTAAAAGGAAATAATGGAACAGAAACAGTTCAAAGCATAGGTTTAAATTTAGAACTGCCACATGAAGCAAATTGGCATCCAGATTGCTTCTCAAAGATGAAAAATCTCAGATTACTCTTCTTCAGAAACGTGCATCTTGTTCAGAGCCTCAATTCTCTGCCTAGTTCACTCAAAGTTCTTATATGGGAGCATTATCCTCTGAAAGCTTTGCCACAAAACATTAGTCAACTAAATGAACTTGTAGAGATCACATTGTGCCATAGCAGAATTCAAAATCTCTGGAATGGAACACCGGTTTTAGACAAACTTAAGTTCATTGATTTGAGCCACTCTAAAAATCTTATTGAAACTCCAGATTTCAGTGGGGTCCCAAATCTGGAGAGTTTGATTCTCGAAGGTTGCATCAACCTAGTTAAGATTCATGAATCTATGGGACATCTGAAGAAGCTAGTTAAATTGAATCTGAAAGATTGCAGAAACCTTTTACCAGATTCTTTGTCAAGTCTCACATCACTGAGGGAATTGAATCTGAGTTTTTGCAATCTAAGTGATGGATCAATCCCAGAAGGTTTCAATGGATTATCATCTCTGGAAAAGTTGGATCTTAGAGGAAACAACTTCACTAACTTATCTGATCATGATAATGATGTCATCTCTAAACTTGTAAATCTTAAGTATCTTGATTTGAGTGATTGTGCTAAGCTTCAATCACTTCCACTGCTTCCACCAAACTTGATCACAGCATCTGCAAGTTTCTGTCCTTCCATGAAACCCTTACAAGATGTTCATCATCTCTTTGCTTCACCTCTCTCAAAGAATCGAAGCCTCCTGCTTCACGAAGGTGATATCACCTTGTTGCATGTTCAAGGGAATGAAATCCCAACCTGGTTTCAAAGACGAGATGATCACTTTTCTACCGATGAAGAAGGATTCGGACCACGAGTATCTATACAAGTAGAGATTCCTTTCAACCAACATCAGACCAATGAATGGTTCAGAATTGGAGTGTGCCTCGTGGTAAACAGCAGAGAAATCAGCAAAGAAAGGAGAATTCATTGGAGCTTCAAAGCCATTAACAATGAAGAAGATGAAAGATTTTGTCAAAGATCAGAACGAGAGTTCTATATTGGGAATGGATTACATTCTCCTGATCCTCATCTCTATATTGCTTTTCTTCCCTTTACTACTAATAATTGTTGGTCGAATAATCTAAGAGGTGATGTTCATGGTCGCCAACTTGTTTTAAGTCTTAGATTTAATATGCAGTGTGATATTAAGGACTATGGTTGGCGTCTCATCTATAGCTCTTAG 1530 0.3732 MKVLENCGLHPTIGINVLIEKSLLSYISFKKGDRLLSMHNLLQEMGKNIVLQESPNDASRRSRLWSQEEIDQVLKGNNGTETVQSIGLNLELPHEANWHPDCFSKMKNLRLLFFRNVHLVQSLNSLPSSLKVLIWEHYPLKALPQNISQLNELVEITLCHSRIQNLWNGTPVLDKLKFIDLSHSKNLIETPDFSGVPNLESLILEGCINLVKIHESMGHLKKLVKLNLKDCRNLLPDSLSSLTSLRELNLSFCNLSDGSIPEGFNGLSSLEKLDLRGNNFTNLSDHDNDVISKLVNLKYLDLSDCAKLQSLPLLPPNLITASASFCPSMKPLQDVHHLFASPLSKNRSLLLHEGDITLLHVQGNEIPTWFQRRDDHFSTDEEGFGPRVSIQVEIPFNQHQTNEWFRIGVCLVVNSREISKERRIHWSFKAINNEEDERFCQRSEREFYIGNGLHSPDPHLYIAFLPFTTNNCWSNNLRGDVHGRQLVLSLRFNMQCDIKDYGWRLIYSS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0959 509 SUPERFAMILY L domain-like 54 334 - -
Acco10g0959 509 ProSiteProfiles Leucine-rich repeat profile. 269 290 IPR001611 GO:0005515
Acco10g0959 509 Gene3D Ribonuclease Inhibitor 74 235 IPR032675 -
Acco10g0959 509 Gene3D Ribonuclease Inhibitor 236 352 IPR032675 -
Acco10g0959 509 SMART LRR_typ_2 267 290 IPR003591 -
Acco10g0959 509 SMART LRR_typ_2 242 266 IPR003591 -
Acco10g0959 509 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 319 IPR044974 GO:0006952
Acco10g0959 509 Pfam Leucine Rich Repeat 244 262 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0959 Acco-ChrAcco10 23481018 23483663 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0959 3 312 WRKY Transcription Factor Family AT4G12020 36.963 8.66e-38 146