Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0941 ATGGTGAACACGAATAGCCATGATGATGAGGAGAATAGTGAACGCGGGTTACCTTCAATTAACGGCGTTGGCGAAGGAGGTGGTGGTGGTGAGGGTGCCGGTGTGGCGGCAGCGGCAGGAGCGGAGGAGGTTGCCCTCAAGAAGGGTCCATGGACAGCGGCGGAGGACGCGGTGCTTATTGATTATGTGACCAAGCATGGTGAAGGCAATTGGAATGCGGTGCAGAGGAAGACGGGGTTGGCTCGTTGTGGTAAGAGCTGTAGGTTGAGATGGACGAACCATTTGCATCCAAATCTGAAGAAGGGTGCTTTTTCTCCTGAGGAAGAGAATCTTATTCTGGAGCTTCATGCTCAGTTGGGCAACAAATGGGCTAGAATGGCCACTCTTTTACCTGGGCGAACAGACAATGAAATCAAGAACTACTGGAACACTAGGATGAAGCGGCGGCAAAGACAAGGCCTGCCACTTTATTCCAGTGATTCTGATCAGCCAACCATATCTGCAGCACCGGCCAAAATTAATTCTTCTGTTACAGAATTGGATTATTATAATCAGAATCACTATCCTCCGTCTTCACTCCATACAGGATCCTCTTATTCCACTCATATCCCTTTCTTGGACCCCAATTATCTTTCTTCTTCCCTTTTCACCTTCCCCTCTCAACAACCTACTTCTTCATTACACATCACTCCACTCCATTCCAAGCGTTCCCGTACCTATTTTTCCCTCCCTGATGCTTCTTTAACTACCCCATTGGCGGATCTTGATGGACTCAACTTTCCAGCCCTATTTAATTCAAGTTCATGTGAAATCTTTCAGACCCCATTAGAATTATCATCTTCAGATCCTGGGGTTCCAAGCTCATCTTCCATTTTGTTTAACAAAATGGAGCTCCCTTCAAACCAATTTGCCCAATCCAATAATGAACTGCTGGAGGATATTCTTCTGGAAGCTCAAGTATTGGTTTCTGACCAGAATCTGAAGAAACGAACCAATTTGAGTTCCAGTGAAGGAAATGGCTTCTTAGATGGATATATTGGCTTGGACGATATGCCTCATAGCTCTGTTTACTGGTCTTCAGGTCTGAGACCAAAGTCAGAAGCATCAGAAATGATTGAGCTTTCCTCATTGGTCTCTTCTGGAATGCCTTCAACCTTTCAGGTTCCTGAATGGCACAACAACGACATTGCTGCACAGGCATCCAATGTTCAATCTTCTGGTGCTACCGCCATAGCTGATGATAATTTTGAGCTTGATTTCAAACCTATTGCTTCGTTGATTCCCGTCAACACCACAACAAACCCTAATGAAAACCCTGGCTACTTCTCATGGGACACCTTACCTGGACTCTGCTGA 1356 0.4587 MVNTNSHDDEENSERGLPSINGVGEGGGGGEGAGVAAAAGAEEVALKKGPWTAAEDAVLIDYVTKHGEGNWNAVQRKTGLARCGKSCRLRWTNHLHPNLKKGAFSPEEENLILELHAQLGNKWARMATLLPGRTDNEIKNYWNTRMKRRQRQGLPLYSSDSDQPTISAAPAKINSSVTELDYYNQNHYPPSSLHTGSSYSTHIPFLDPNYLSSSLFTFPSQQPTSSLHITPLHSKRSRTYFSLPDASLTTPLADLDGLNFPALFNSSSCEIFQTPLELSSSDPGVPSSSSILFNKMELPSNQFAQSNNELLEDILLEAQVLVSDQNLKKRTNLSSSEGNGFLDGYIGLDDMPHSSVYWSSGLRPKSEASEMIELSSLVSSGMPSTFQVPEWHNNDIAAQASNVQSSGATAIADDNFELDFKPIASLIPVNTTTNPNENPGYFSWDTLPGLC 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0941 451 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 95 IPR017930 -
Acco10g0941 451 Pfam Myb-like DNA-binding domain 48 95 IPR001005 -
Acco10g0941 451 Pfam Myb-like DNA-binding domain 101 144 IPR001005 -
Acco10g0941 451 CDD SANT 103 144 IPR001005 -
Acco10g0941 451 ProSiteProfiles Myb-like domain profile. 96 146 IPR001005 -
Acco10g0941 451 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 150 IPR017930 -
Acco10g0941 451 Gene3D - 103 167 - -
Acco10g0941 451 FunFam MYB-related transcription factor 47 100 - -
Acco10g0941 451 ProSiteProfiles Myb-like domain profile. 43 95 IPR001005 -
Acco10g0941 451 Gene3D - 47 100 - -
Acco10g0941 451 CDD SANT 50 95 IPR001005 -
Acco10g0941 451 SMART sant 100 148 IPR001005 -
Acco10g0941 451 SMART sant 47 97 IPR001005 -
Acco10g0941 451 SUPERFAMILY Homeodomain-like 46 142 IPR009057 -
Acco10g0941 451 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 15 398 - -
Acco10g0941 451 MobiDBLite consensus disorder prediction 1 35 - -
Acco10g0941 451 FunFam Transcription factor GAMYB 103 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0941 Acco-ChrAcco10 23221278 23223997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0941 26 451 MYB Transcription Factor Family AT4G26930 37.004 1.07e-67 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco10g0941 Myb_DNA-binding 8.7e-13 CL0123