Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0936 ATGGGTGGATGTTGTCAGTCCAAGCCTGATACAATTCTTCGGGAGCCATCTGAGGATGTGAATAAGGTCTACACAATCCATCATGATGAATTTCTGGGTTGTGGAATTTATGGGATGGCCTATCGTTGCACTGAGATATCAACAGACAGACTATATGCATGCAAGAAGATTCGAAAGATGAGAAGTGAAGCTGATCATATAAGGAGGGAGGTTGAAATCATGCAACGTCTTAGTGGGAGGCGCAATATTGTGGGGTTCGAAAGTGTTCATGAAGAAAAAGAATATGTTTATATTGTCATGGAATTGTGTGAAGGTGGCCAACTCAAGGTGAACAGGCGATACGATGAACCCGATGCTGCTATAATTTGCAAGCAGATTCTTGAAGCCGTTCATACTTGCCACTCTGACAATGTGATGCACGGGGATGTCAGACCTCAGAATTTATTGTTCTCCGCTGGAGACCACAACGATGATGCACTTCTCAAACTTACGGATTTTGGTCTTTCGGCTGTTATAGAAGAAGCATGGATGGATGAAGGTCCTATTGATTTAGAAACAGATCCATGGCCAGACATTTCACCAGCTGCTAAGGACCTTCTCCGTAAGATGCTCAACCGCAACCCCAAGGAACGCATCACTGCTGCTCGGGCTCTAGGTATGATTCTTTGA 669 0.4439 MGGCCQSKPDTILREPSEDVNKVYTIHHDEFLGCGIYGMAYRCTEISTDRLYACKKIRKMRSEADHIRREVEIMQRLSGRRNIVGFESVHEEKEYVYIVMELCEGGQLKVNRRYDEPDAAIICKQILEAVHTCHSDNVMHGDVRPQNLLFSAGDHNDDALLKLTDFGLSAVIEEAWMDEGPIDLETDPWPDISPAAKDLLRKMLNRNPKERITAARALGMIL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0936 222 SUPERFAMILY Protein kinase-like (PK-like) 28 219 IPR011009 -
Acco10g0936 222 ProSitePatterns Tyrosine protein kinases specific active-site signature. 138 150 IPR008266 GO:0004672|GO:0006468
Acco10g0936 222 ProSiteProfiles Protein kinase domain profile. 26 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0936 222 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Acco10g0936 222 Pfam Protein kinase domain 27 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0936 222 Gene3D Transferase(Phosphotransferase) domain 1 17 177 - -
Acco10g0936 222 PANTHER SERINE/THREONINE-PROTEIN KINASE 174 218 - -
Acco10g0936 222 Coils Coil 57 77 - -
Acco10g0936 222 Gene3D Transferase(Phosphotransferase) domain 1 178 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0936 Acco-ChrAcco10 23179038 23180699 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0936 7 218 EF-hand Containing Proteins AT1G50700 37.455 1.61e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Acco10g0936 Pkinase 3.4e-34 CL0016