Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0935 ATGGGTGGATTTCGTCAGTTGATCAAAGAACGTTTTAAGTCCAAGCGTGATACAATTCTTCGGAAGCCATATGAGGACGTGAATGAGTTCTACACAATCGATAGAGAACTGGGTAGTGGAACTTATGGGGTGACCTATCGTTGCACTGAGAGATCAACAGGCAGATCATATGCATGCAAGAAGATTTCAAAGATGAGGAATAATGAAGTGACGATGAGGAGAAGTCAAGCTGATCATGAAAGGAATATAGGGAGGCAGGTTGAAATCATGCAGCTTCTTAGTGGGAGGCCCAATATTGTGGGGTTCAAAAGTGCTCATGAAAATGAACAATTTGTTCATCTTGTCATGTATTTGTGTGAAGGCGGCGAACTTCCTGTGGACCAGCGATACGATGAAAGAAATGCTGCTAGAATTTGCAAGCAGATTCTTGAAGCTGTTCGTGCTTGCCACTCTATCCGTGTGATGCATAGGGATGTCAAACCTCAGAATTTATTGTTCTCCACTAGTGACCACAGCAATACACTTCTCAAACTTTCGGATTTTGGTGTTTCGGTTTTTATAAGGGAAGGAAGAAGAGAGGAGGATAGAGTAGGGACTGCTCCTTACACAGCTTCTGAAGTTATAAATCACAGATATGGGAAGGAAGCAGACATGTGGAGTGCTGGCGTTATATTGTATTCCTTACTCAGTGGAAGGCTTCCTTTTGGACGCGGTAAGTTAGCTATAATAGACGTGAATGTGTTCATTTCCTAA 753 0.425 MGGFRQLIKERFKSKRDTILRKPYEDVNEFYTIDRELGSGTYGVTYRCTERSTGRSYACKKISKMRNNEVTMRRSQADHERNIGRQVEIMQLLSGRPNIVGFKSAHENEQFVHLVMYLCEGGELPVDQRYDERNAARICKQILEAVRACHSIRVMHRDVKPQNLLFSTSDHSNTLLKLSDFGVSVFIREGRREEDRVGTAPYTASEVINHRYGKEADMWSAGVILYSLLSGRLPFGRGKLAIIDVNVFIS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0935 250 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Acco10g0935 250 SMART serkin_6 31 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0935 250 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 235 - -
Acco10g0935 250 Gene3D Phosphorylase Kinase; domain 1 21 119 - -
Acco10g0935 250 SUPERFAMILY Protein kinase-like (PK-like) 18 235 IPR011009 -
Acco10g0935 250 Gene3D Transferase(Phosphotransferase) domain 1 120 245 - -
Acco10g0935 250 Pfam Protein kinase domain 31 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0935 250 ProSiteProfiles Protein kinase domain profile. 31 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0935 250 ProSitePatterns Protein kinases ATP-binding region signature. 37 60 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0935 Acco-ChrAcco10 23141610 23143155 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0935 18 235 EF-hand Containing Proteins AT1G50700 54.054 1.48e-75 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Acco10g0935 Pkinase 4.3e-51 CL0016