Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0930 ATGAAGATAGAAGCAGAAACATTGGTAATGAGGTTTAAGGAGATTGTTTCTTTGTGCGTTGGAATCTCCAAGAGAATTCTCGAACGAGCCGTTTTTGCTGCATTCACCTGCATTCTCGCTCTCGGAGGGTCAATAATGGGGACAATAGTGGGAGGGATGAAGGGTCATAGATCAGAGGCTGGGATACTTGATGGAGCTGGCAAAGGAGCAGTTTCAGGAGCCATTGCTGCTCTTGAATTACTTGATTTTGTTGCTGATGAAGATCATCAGCCTATGTCCAAGGTTGCCCTATTAATTAGTTTGTTCAATGGGAAAGTCCTAATGGAATGTTTTTATTCAGGCTATCAATGGCATATTGGGACTCCAGAAACAATCTACAGAGAAGTATCAGATATTTATGATATGAAAGGAATACCTGGACTGTCCCAGAAATTGATTCAAGGCCTGCCTTTGCATCAATTCAACTCCACAGAAATGCCAACTTTTTACAATGAATCTTGCTGCTCCATTTGCTTCCAGAAGTTTGAAGATGGAGATATGGTAAGGATGCTTCCAAAATGTGACCATGTTTTTCACTTTCACTGTATAGATAAATGGCTCATCCAACAAGGATCTTGCCCTATGTGTAGAACTTATGTTCTTGAGGATCATTTTGATGTTTTTTTTGGGTAA 672 0.4033 MKIEAETLVMRFKEIVSLCVGISKRILERAVFAAFTCILALGGSIMGTIVGGMKGHRSEAGILDGAGKGAVSGAIAALELLDFVADEDHQPMSKVALLISLFNGKVLMECFYSGYQWHIGTPETIYREVSDIYDMKGIPGLSQKLIQGLPLHQFNSTEMPTFYNESCCSICFQKFEDGDMVRMLPKCDHVFHFHCIDKWLIQQGSCPMCRTYVLEDHFDVFFG 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0930 223 ProSiteProfiles Zinc finger RING-type profile. 168 210 IPR001841 -
Acco10g0930 223 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 214 IPR013083 -
Acco10g0930 223 SMART ring_2 168 209 IPR001841 -
Acco10g0930 223 Pfam Ring finger domain 168 210 IPR001841 -
Acco10g0930 223 CDD RING-H2_EL5-like 167 210 - -
Acco10g0930 223 SUPERFAMILY RING/U-box 162 216 - -
Acco10g0930 223 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 19 211 IPR044523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0930 Acco-ChrAcco10 23098076 23100752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0930 33 213 C3H Transcription Factor Family AT5G66070 33.333 2.18e-31 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g0930 10 23098076 23100752 Acco10g0930 10 23098076 23100752 ECH