Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0927 ATGTATTATTCTTCTCTCATGAGGTTTAGCTGCATCATGGAAGGTGTTATTGAGAGAAGAGTTATTCCCTCAGATAACAGTTGCCTCTTCAATGCAATCGGGTACGTTATGGATCATGATAAAACTAAAGCTTCTGAGTTGAGACAGGTTATAGCTGCAACAGTAGCAAGTGATCCACATAAATATTCTGTAGCATTTCTTGGAAAGCCGAATGCAGACTATTGTGCCTGGATCCTTGACTCAGAGAAGTGGGGAGGTGCCATTGAGCTTTCAATATTAGCAGATTATTATGGACGTGAAATCGGAGCATATGATATCCAAACAACACGATGTGATGTGTATGGTCAGGACAGAAAGTATTCTGAAAGGGTCATACTGCTTTATGATGGTCTCCATTATGACGCATTAGCTATGTCTCCCTTTGAGGGTGCCCCTGAGGAGTTCGATCAGACCATATTTGCTGTACAGAAAGACAGAAGCATTGGACCTGTTGAGAGGCTTGCTCTTGATTTTGTCAAGGACCAACAAAGGAAACGAAGCTATACCGACACCTCCAACTTCACGCTTCGCTGTGGGGTTTGCCAAATAGGCGTAATTGGTCAGAAGGAGGCAGTGGAGCATGCACAAGCAACTGGTCATGTTAACTTTCAAGAATATAGATGA 663 0.4284 MYYSSLMRFSCIMEGVIERRVIPSDNSCLFNAIGYVMDHDKTKASELRQVIAATVASDPHKYSVAFLGKPNADYCAWILDSEKWGGAIELSILADYYGREIGAYDIQTTRCDVYGQDRKYSERVILLYDGLHYDALAMSPFEGAPEEFDQTIFAVQKDRSIGPVERLALDFVKDQQRKRSYTDTSNFTLRCGVCQIGVIGQKEAVEHAQATGHVNFQEYR 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0927 220 CDD OTU_plant_OTU1_2-like 15 178 - -
Acco10g0927 220 Pfam OTU-like cysteine protease 24 110 IPR003323 -
Acco10g0927 220 Gene3D - 7 185 - -
Acco10g0927 220 ProSiteProfiles OTU domain profile. 17 139 IPR003323 -
Acco10g0927 220 SUPERFAMILY Cysteine proteinases 16 136 IPR038765 -
Acco10g0927 220 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 19 218 - -
Acco10g0927 220 FunFam ubiquitin thioesterase OTU1 13 185 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0927 13 220 C2H2 Transcription Factor Family AT1G50670 81.250 1.37e-128 359