Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0895 ATGCTGTTCCACGGACGCGGCTTTGGTTTGATTATATTTCATCAGCTTACTGAATTTGATCAAGTAAAACGAAGTTGCCGCAGGCGACTTGCAGGCCACAATGAACGCATCAATAGTTTCAGCTTTTGCTTATTGTGGTCAGAGAACAAATCTAAATATTTGGAACTCACGTGGACAGATAACCGGGGCAGAGTTGGTGGCTTTCTGATGGAATTTGCTGCAGACCATATGCCAACTCTGAGAAATGAGTTGCCAGCAGCAGCATCAATGGAGCAAGTTGCAGGCCATCAAAGTTGGGTGGGCAAGATAAACAGCTTTGGTCCCGGAAATCCTCCCGGGGAATGCTTCGCTGGAATTGCAGACACAAGCTGTGCTCTCTCTCTTCTGTCAAATCAAACATGGGGCCTCAGAAACACACCACCAACTCTTGGAGTGAACAACTTACGCTTTGGAGGGACATCCATCACACAAGTTGCTACATCCTCTCATGGTGATCCCATTCCCATCCATCACCTTTCAAATGCCTCAGGGTCTTTCAAAGGCGTTGGACGAAATGTTTGTTTGCATGATGAGGTTCCTGATCTTGGTGCGGCTCAGATTTCACTGTCTAATTGTGAACTTCCCGGTGAACTTGTGATGCCACAAGCCGGCCAGAGGCAATATATTGATCCGCAATCTGAGGCCTATGAGTCTTCTCAGCTGATGCACTGGTCACTTTGA 720 0.4722 MLFHGRGFGLIIFHQLTEFDQVKRSCRRRLAGHNERINSFSFCLLWSENKSKYLELTWTDNRGRVGGFLMEFAADHMPTLRNELPAAASMEQVAGHQSWVGKINSFGPGNPPGECFAGIADTSCALSLLSNQTWGLRNTPPTLGVNNLRFGGTSITQVATSSHGDPIPIHHLSNASGSFKGVGRNVCLHDEVPDLGAAQISLSNCELPGELVMPQAGQRQYIDPQSEAYESSQLMHWSL 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0895 239 ProSiteProfiles Zinc finger SBP-type profile. 1 40 IPR004333 GO:0003677
Acco10g0895 239 Pfam SBP domain 13 36 IPR004333 GO:0003677
Acco10g0895 239 SUPERFAMILY SBT domain 13 37 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0895 Acco-ChrAcco10 22775073 22777661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0895 13 131 SBP-box Gene Family AT2G42200 36.429 8.47e-11 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Acco10g0895 SBP 2.3e-06 No_clan