Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0866 ATGGACCTCAATTTGGGATATAAGAAGCTGTTCGTTATTCTTCTCTCAATCGCTTCCACTTCACAGTTCTTACTCTCACAATTTGCTTTCGCAGACACAGGCATTCTCGTCAGTGAAGAAGTTGAAACATTGAAAGGGATAGCGAGGAAAATAGGGAAGAATGACTGGGACTTTGAAAATGAGGATCCATGCAGTGGAAAAGGGCAGTGGAATGCTTCTAATGAGAACACACATTTTGAGAGCATTGTGGTCTGTAAATGTAACGGCTCTTCTTGCCATGTTGTAAGCATATCCTTGAAGGCTCAGAATCTTTCTGGTGCTATCCCCCCTGAATTTTCCAAGCTAAATCATCTCAAGAAATTGACCCTGAGTCTTAACATTCTCAATGGTTCAGTACCTGACGAATGGGCTAGTATGCAATTGGCTTCCCTCTCGATCATGGGAAATAACTTGTCAGGTCCATTCCCCACAGTTCTCACAAACATCACAACTCTCGAAAACCTGACTATTGAAGGAAATCTATTTTCAGGTCCCATTCCACCAGATATTGGAAAGTTGATCAAGTTAGAAAAACTCCATCTGTCGTCAAATGCATTCACTGGAGAATTGCCAGTTGAACTTTCCAAGTTGAAGAATTTGACTGATTTGAGGATAAGTGACAATGACATCTCTGGGCAGATTCCTTATTTTATTGGTAACTGGACACTAATTAACACACTGCACATGGTGGGTTGCTCTTTTGAGGGGCCCATACCTTCAAGCATTTCAACCTTGACAAGCTTAAGTGATTTGAGGATAACTGATCTAAAAGGTGGAGCCTCTGATTTCCCATCATTAAGCAACATGAAATCCATGAAGAAATTGATATTGAGGAACTGTATGATTAAAGGGGAGATCCCGGAAGATATTGGGAGAATGGAAAACCTGACAACCTTAGATTTGAGTTTCAATAACTTAACTGGAGAGATACCAACTACTTTTTCCCAACTTGGAAAAGCAAAATTTGTATACCTTACTGGGAACAAGCTCGGGGGGACTATTCCTGACTGGGTCCTTGAATCAAACAAAAAACAAGTTGATATTTCTAATAATAACTTAAGCTGGGATAACTCAGGTCCTCGTGAATGCCCACAAGGGAGTGTAAACATAGTGGAATGCTACTCTTCAGCCGTGGATACAGGAAGTCAAGTTGATCCCTGCCTGAAAAGGAACTTCCCATGTCCTGCTTCGACTAAGCAACATCATTATTCAATGCATGTTAATTGTGGTGGTAACGAAACAATTATCAATGATATAATATATGAATCTGACGTAGTAAAAAGAGGTGCTGCAGTGTTTTACTCCACCCAGAATTGGGCACTTAGCAGCACAGGTGACTTCATGGATAATGATAACAACGATGATAACTATATTCAGACCAATACATCTACACTTCTCAATGTCTCCGTCCTCGATTCACAACTGTACACAACAGCTCGCACATCTCCTCTTTCTCTCACATATTATGGACTCTGTCTCTTAAATGGAAACTACAATGTCAAGCTTCACTTTGCAGAGATTTTGTTTTTGAATAATAGATCATATTACAGTCTTGGAAGAAGGATATTTGATATCTACATCCAGGGGGACTTGGTCCTGAAAGATTTCAACATAGAAAGTGAAGCCGGTGGTACAGGTAAACCTGTTGTTAAGACATTCAATACTACAGTAACCCAGCATACCTTGAAAATTCACTTTTACTGGGCTGGAAAGGGCACAACAGGCATACCAAGACGAGGATATTATGGACCTCTAGTGTCTGCTATATCTGTGGATCCTAATTTTAAACCTCCATCCGGGAATCGAAAGAGAATTTATATCGTGGTGGTTAGCTCAATAGCTGCTGTTGTAATTCTTGTTCTTCTGATCTTTGGCATCATGAGGTGGAAGGGCTGGCTAGGAGGCAATGACTCTGTGTATAAAGATCTTAGAGGTTTAGATCTGCAGATGGGATTGTTTACATTGAGTCAAATCAAAGCATCAACTGAAAACTTCAATGCAGCCAACAAAATTGGGGAAGGTGGCTTTGGCTCTGTTTACAAGGGTCTACTGCCAGATGGCACAGTAATTGCAGTAAAACAGCTCTCCTCAAAATCTACTCAAGGAATCCGTGAATTTGTGAATGAGTTAGGAATGATATCTGGCCTTCAACATCCCAATCTTGTTAAGCTTTATGGATGCTGTGTGGAAGGAGACCAGTTAATGTTGATATATGAGTATATGGAAAACAATTGTCTATCTCGTGTTCTTTTTGAGAAAAATCCTGCCCGCAAAGTGATATTGGACTGGGCAACCAGGAGGAAAATTTGCCTTGGTATAGCTAGAGCCTTGGCTTTTCTCCACGAAGAGTGCGTCATTAAAGTCATACACAGGGATATAAAAACAAGTAATGTGTTGCTTGACAAGGATTTTAATGCTAAGATTTCAGACTTCGGTTTTGCAAAACTCAATGTAGATGAAGATACTCATGTTAGCACTCGCGTTGCAGGAACTATTGGTTATATGGCTCCTGAGTATGCAATGCGTGGTTATTTAACTGATAAAGCTGACATTTATAGCTTCGGGGTAGTTGCATTGGAAATCGTCAGTGGAAGGAGTAATGCAAGTTTCAGACCCAGCGAGGAATTCATTTTTCTCCTTGATTGGGCCATTGTTTTGGGAGAGAAAGGAAGGCTGATAGAGCTGGTGGATCCAGATTTGGGATCAGAATACTCAAGGGAGGAGGCCATGGTAATACTAAACGTTGCACTCTTGTGTACCAATGCATCTCCCACACTTAGGCCAACAATGTCTCAAGTTCTGAGCATGCTTGAAGGTAGAAGTAACACGCGGGAACTACTTTCTGATGATCCCGGACATGATGAAGCAGTTAATTTCAAATATGAGGCCTTAAGAAGTCATTTCTGTGAGAATCTAAGCCTACGAGAAAGCATGTCAATTCATGGTCAATGTCCTGGTTCCTCTTGTTCAGCCTTCGAAGTAGAAGAGAAGCACCTCCTTGGAAATGTTAGCTCAGACTCAACTACTAAAGCAGACTAG 3078 0.4094 MDLNLGYKKLFVILLSIASTSQFLLSQFAFADTGILVSEEVETLKGIARKIGKNDWDFENEDPCSGKGQWNASNENTHFESIVVCKCNGSSCHVVSISLKAQNLSGAIPPEFSKLNHLKKLTLSLNILNGSVPDEWASMQLASLSIMGNNLSGPFPTVLTNITTLENLTIEGNLFSGPIPPDIGKLIKLEKLHLSSNAFTGELPVELSKLKNLTDLRISDNDISGQIPYFIGNWTLINTLHMVGCSFEGPIPSSISTLTSLSDLRITDLKGGASDFPSLSNMKSMKKLILRNCMIKGEIPEDIGRMENLTTLDLSFNNLTGEIPTTFSQLGKAKFVYLTGNKLGGTIPDWVLESNKKQVDISNNNLSWDNSGPRECPQGSVNIVECYSSAVDTGSQVDPCLKRNFPCPASTKQHHYSMHVNCGGNETIINDIIYESDVVKRGAAVFYSTQNWALSSTGDFMDNDNNDDNYIQTNTSTLLNVSVLDSQLYTTARTSPLSLTYYGLCLLNGNYNVKLHFAEILFLNNRSYYSLGRRIFDIYIQGDLVLKDFNIESEAGGTGKPVVKTFNTTVTQHTLKIHFYWAGKGTTGIPRRGYYGPLVSAISVDPNFKPPSGNRKRIYIVVVSSIAAVVILVLLIFGIMRWKGWLGGNDSVYKDLRGLDLQMGLFTLSQIKASTENFNAANKIGEGGFGSVYKGLLPDGTVIAVKQLSSKSTQGIREFVNELGMISGLQHPNLVKLYGCCVEGDQLMLIYEYMENNCLSRVLFEKNPARKVILDWATRRKICLGIARALAFLHEECVIKVIHRDIKTSNVLLDKDFNAKISDFGFAKLNVDEDTHVSTRVAGTIGYMAPEYAMRGYLTDKADIYSFGVVALEIVSGRSNASFRPSEEFIFLLDWAIVLGEKGRLIELVDPDLGSEYSREEAMVILNVALLCTNASPTLRPTMSQVLSMLEGRSNTRELLSDDPGHDEAVNFKYEALRSHFCENLSLRESMSIHGQCPGSSCSAFEVEEKHLLGNVSSDSTTKAD 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0866 1025 Gene3D Ribonuclease Inhibitor 203 266 IPR032675 -
Acco10g0866 1025 Gene3D Ribonuclease Inhibitor 267 379 IPR032675 -
Acco10g0866 1025 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 648 753 - -
Acco10g0866 1025 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 276 369 - -
Acco10g0866 1025 CDD STKc_IRAK 684 952 - -
Acco10g0866 1025 Pfam Malectin domain 417 602 IPR021720 -
Acco10g0866 1025 Pfam Protein kinase domain 680 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0866 1025 Gene3D Transferase(Phosphotransferase) domain 1 754 970 - -
Acco10g0866 1025 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 204 270 - -
Acco10g0866 1025 ProSiteProfiles Leucine-rich repeat profile. 308 330 IPR001611 GO:0005515
Acco10g0866 1025 FunFam Putative LRR receptor-like serine/threonine-protein kinase 754 962 - -
Acco10g0866 1025 ProSitePatterns Protein kinases ATP-binding region signature. 684 706 IPR017441 GO:0005524
Acco10g0866 1025 Gene3D Phosphorylase Kinase; domain 1 651 753 - -
Acco10g0866 1025 SMART serkin_6 678 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0866 1025 ProSiteProfiles Protein kinase domain profile. 678 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0866 1025 SUPERFAMILY Protein kinase-like (PK-like) 663 952 IPR011009 -
Acco10g0866 1025 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 415 607 - -
Acco10g0866 1025 Pfam Leucine Rich Repeat 308 330 IPR001611 GO:0005515
Acco10g0866 1025 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 42 203 - -
Acco10g0866 1025 Gene3D - 413 606 - -
Acco10g0866 1025 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 43 983 - -
Acco10g0866 1025 ProSitePatterns Serine/Threonine protein kinases active-site signature. 801 813 IPR008271 GO:0004672|GO:0006468
Acco10g0866 1025 SUPERFAMILY L domain-like 85 350 - -
Acco10g0866 1025 Gene3D Ribonuclease Inhibitor 51 202 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0866 Acco-ChrAcco10 22507927 22518827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0866 31 1003 Receptor kinase-like Gene Family AT1G53440 51.060 0.0 954
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco10g0866 Pkinase 1.3e-45 CL0016