Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0809 ATGGATGAACCCTTTCTCTCCAACAAACGAGTGGTTGCAGAACCATCAAGCAGGCCACCACCATCCCTAAGAGAACTTAGCCCATCTTATATTGATCTTATCACCAATGAAGAAATCATTCAGATCATTACCACACCCAAGAACAGCCCTTCGTACTTGAACGTCATAGCCAACTTGAACAGAAAAAAGAAGATAGCCCATCGCTCACATTCTGCTCCCTCAGTTTTCACTGATGTCAAAGGAGATGGTCACGATTCATTTGACCTCAGTATTTCACAAAAAACATCACCTGCAATAGTGAGGCTATCCTTTATTGGTGTCATCTTGTATGTGGCAACTGGGGTTCTAGTGTACTTGATAAGTGGGAGTTTCAAGGGCACATCCACTTACAAGCTTGTGGATGCTGTGTACTTCACTGTGGTAACTCTCTGTACAATAGGGTATGGTGATATTGTCCCAGACACAGCATTCACCAAAATCTTTACCTGTGGGTTCATTCTGGTGGGTTTCGGATTCGTCGGCATCCTGCTGAATGGCTTGGTCACCTATATTTGTGATAGACAAGAGGAAATTTTACTGAATGCCATGGATGAGAATAGGTTTAATACACTAGTTAGATCATATATGATAGACAAAGAGAAAGGGAGAATGAGGATAAGAACCAAAGTGTGTCTAGCTTTGGCAGTGGTTGTTTGTTGTATTGCTATAGGAACAATTAGTGCTCGCTTCCTTGAGAGCTTGGATTGGCTGGACTGCTTTTATCTCTCTGTTACTTCTGTTACAACAGTGGGTTATGGGGATTATGCTTTTACTACTGAGGGTGGAAGGTGTTTTGCATCTTTTTGGCTCTTGGTGAGCACATTGGCAGTCGGCAGGGCCTTCCTGTACCTAACTGAATACAGTATTGACAAGAGAAATCGTACTATTGCAAAATGGATTCTTCACAAGAAGATTACCTTGTCAGATTTAGTGGCCGCTGACCTTGACAATGATGGATCAATCAGCAAGTCTGAATTTGTCATATATAAGCTTAAGGAGATGGGGAAGATAACTGAGAATGACATTGTACAAATTGGCAAACAATTTGACTCGTTGGACAGTGGCCAATGTGGCAAGATTACTCTTGCTGACCTAATGGAAACTGCCTAA 1149 0.4204 MDEPFLSNKRVVAEPSSRPPPSLRELSPSYIDLITNEEIIQIITTPKNSPSYLNVIANLNRKKKIAHRSHSAPSVFTDVKGDGHDSFDLSISQKTSPAIVRLSFIGVILYVATGVLVYLISGSFKGTSTYKLVDAVYFTVVTLCTIGYGDIVPDTAFTKIFTCGFILVGFGFVGILLNGLVTYICDRQEEILLNAMDENRFNTLVRSYMIDKEKGRMRIRTKVCLALAVVVCCIAIGTISARFLESLDWLDCFYLSVTSVTTVGYGDYAFTTEGGRCFASFWLLVSTLAVGRAFLYLTEYSIDKRNRTIAKWILHKKITLSDLVAADLDNDGSISKSEFVIYKLKEMGKITENDIVQIGKQFDSLDSGQCGKITLADLMETA 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0809 382 SUPERFAMILY EF-hand 325 380 IPR011992 -
Acco10g0809 382 Gene3D - 96 191 - -
Acco10g0809 382 Gene3D - 192 323 - -
Acco10g0809 382 FunFam Two-pore potassium channel 2-like 201 325 - -
Acco10g0809 382 ProSitePatterns EF-hand calcium-binding domain. 327 339 IPR018247 -
Acco10g0809 382 MobiDBLite consensus disorder prediction 1 24 - -
Acco10g0809 382 PRINTS Two pore domain K+ channel signature 141 169 IPR003280 GO:0005267|GO:0016020|GO:0071805
Acco10g0809 382 PRINTS Two pore domain K+ channel signature 261 270 IPR003280 GO:0005267|GO:0016020|GO:0071805
Acco10g0809 382 SUPERFAMILY Voltage-gated potassium channels 95 184 - -
Acco10g0809 382 Gene3D - 324 382 - -
Acco10g0809 382 FunFam Two-pore potassium channel 2-like 98 194 - -
Acco10g0809 382 Pfam Ion channel 230 298 IPR013099 -
Acco10g0809 382 Pfam Ion channel 107 184 IPR013099 -
Acco10g0809 382 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 130 357 IPR003280 GO:0005267|GO:0016020|GO:0071805
Acco10g0809 382 SUPERFAMILY Voltage-gated potassium channels 211 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0809 Acco-ChrAcco10 21283445 21285449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0809 67 380 Ion Channels AT4G18160 52.698 3.30e-109 325