Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0804 ATGTCGTCCAATAGTTCTTTGAATGTGCAGCTGTCTAAGAAGACGACATTTTTGGGTTTGAAACTATGGGTCTTAATTGGGATAGGTGTGGGTGCATTTATAGTCCTGATTCTTTGTATATTATCCATATGGGCGATGTTTTGGAGAAAATCAAAGAGACCGCTGAACAAATACACTACCACATCACAAATACCAAATGTGTCGAAAGAGATCAAGGTCGATAAGGTTGGAGTGCAGAGTTCTTATAATCACCCAGGAAGTGTATATGTTCAATTTCATGAGAAGGCAAGTGATAGGAATCCGGATAAGGTGTTAGTTGAGTCAGGCATGAGTAAATCCAGTGATCCGGACAATAATAGTCAGTGTAGTTCAATATATCATCATGAGAGAGGAGGTAGTTCGATGTCGGGTGAGTATGGGAGTTCTGAGACCTTCAGGAAGCAATCTGCATTATCATATGGTGGAATAGTGACTGCCTCTCCTTTAATTGGTTTGCCAGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACGCTTAGGGATCTTGAACTTGCGACAAACCGGTTCTCAGCAGAGAATGTGATTGGTGAGGGTGGATATGGGGTTGTTTACCGGGGAATGTTGATCAATGGGACCGAGGTGGCTGTGAAGAAAATTCTTAATAACTTGGGACAAGCAGAGAAAGAGTTCAGGGTTGAAGTGGAAGCTATAGGCCATGTTCGTCATAAAAATCTTGTACGCCTGCTTGGATACTGCATTGAAGGAGTTCACAGGATGCTTGTGTATGAGTATGTGAATAATGGTAACTTAGAGCAATGGTTACATGGGGCCATGCGCCAGCATAAGACACTTAACTGGGAGGCCCGCATGAAAGTTATAACTGGTACAGCCAAAGCGCTTTCATACTTGCATGAAGGGATAGAACCGAAAGTTGTTCATCGTGACATAAAATCTAGCAACATATTAATCGATGATGAGTTCAATGCGAAGGTTTCTGACTTTGGCTTGGCCAAGCTCTTGGGTTCAGGAGAAAGTCACATAACAACTAGAGTCATGGGAACATTCGGTTATGTGGCACCTGAGTATGCCAATACTGGTTTGTTAAATGAGAAGAGCGATGTTTACAGCTTTGGTGTTCTACTCCTTGAAGCCGTTACTGGAAGGGACCCAGTAGACTATGCACGTCCTGCTGATGAGGTTAATCTTGTTGAATGGATCAAGCTTATGGTCAGTGCTAGAAGAGCCGAGGAAGTCATAGATCCAAGCCTTGAGGTTAAACCGTCAACACGGGAATTGAAACGTGCCCTTCTGGTTGCACTTAGGTGTCTTGATCCTGCTGCAGAAAAGAGGCCCAAAATGAGTCAGGTTGTGAGGATGTTTGAAGCTGACGAAAATCCATTCCGAGAGGATCGAAGGAACCGAAAGGGCCACATTGCCAGCATGGAAATGGAAACCACGAAGGATCTTTCTGGTGGACCTTATGCTGGGAAAAATGGGGATTCTGAAAGCCATAAGCCAGAGGCAACTAAGAGGATGATTGACAATCATGATAACTTGGCCTAG 1563 0.4389 MSSNSSLNVQLSKKTTFLGLKLWVLIGIGVGAFIVLILCILSIWAMFWRKSKRPLNKYTTTSQIPNVSKEIKVDKVGVQSSYNHPGSVYVQFHEKASDRNPDKVLVESGMSKSSDPDNNSQCSSIYHHERGGSSMSGEYGSSETFRKQSALSYGGIVTASPLIGLPEFSHLGWGHWFTLRDLELATNRFSAENVIGEGGYGVVYRGMLINGTEVAVKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRQHKTLNWEARMKVITGTAKALSYLHEGIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLGSGESHITTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEAVTGRDPVDYARPADEVNLVEWIKLMVSARRAEEVIDPSLEVKPSTRELKRALLVALRCLDPAAEKRPKMSQVVRMFEADENPFREDRRNRKGHIASMEMETTKDLSGGPYAGKNGDSESHKPEATKRMIDNHDNLA 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0804 520 MobiDBLite consensus disorder prediction 467 520 - -
Acco10g0804 520 MobiDBLite consensus disorder prediction 107 141 - -
Acco10g0804 520 Pfam Protein kinase domain 191 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0804 520 MobiDBLite consensus disorder prediction 467 482 - -
Acco10g0804 520 Gene3D Phosphorylase Kinase; domain 1 171 264 - -
Acco10g0804 520 Gene3D Transferase(Phosphotransferase) domain 1 265 478 - -
Acco10g0804 520 FunFam Putative receptor-like serine/threonine-protein kinase 265 475 - -
Acco10g0804 520 MobiDBLite consensus disorder prediction 500 520 - -
Acco10g0804 520 PANTHER OS01G0323000 PROTEIN 1 482 - -
Acco10g0804 520 FunFam Putative receptor-like protein kinase 171 264 - -
Acco10g0804 520 SMART serkin_6 189 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0804 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Acco10g0804 520 ProSiteProfiles Protein kinase domain profile. 189 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0804 520 MobiDBLite consensus disorder prediction 111 141 - -
Acco10g0804 520 SUPERFAMILY Protein kinase-like (PK-like) 173 462 IPR011009 -
Acco10g0804 520 CDD STKc_IRAK 195 461 - -
Acco10g0804 520 ProSitePatterns Protein kinases ATP-binding region signature. 195 218 IPR017441 GO:0005524
Acco10g0804 520 Coils Coil 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0804 Acco-ChrAcco10 21254829 21257858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0804 19 463 Trihelix Transcription Factor Family AT1G70460 38.889 8.01e-94 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Acco10g0804 Pkinase 2.8e-48 CL0016