Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0787 ATGGAGGATGAAAGTAGTAAAATGAATAATATGGTGAAGAATGATGAAGAAGAAGAGGAAGATGAGGAGAAAGGGATGCTTCCAGGGTTCAGATTCCATCCAACAGATGAAGAATTGGTAGGGTTTTATCTCACAAGGAAGGTTCAGAAGAAGACTCTTCGTATTGAACTCATCAAACATATTGATATCTACAAATACGATCCCTGGGATCTCCCAAAGGCGAGCGGGAGTGTAGATGAGAAGGAGTGGTATTTCTTCTGCAAGAGGGGAAGGAAGTATAGGAACAGCATTAGGCCAAACAGGGTGACTGGGTCAGGATTCTGGAAAGCAACAGGAATTGACAAGTCTATTTACAATAATGCCCTCACCCACTGCATTGGCCTCAAGAAGTCCCTCGTCTATTACAAGGGCAGTGCTGGTAAAGGCACCAAGACTGATTGGATGATGCATGAGTTTCGCCTCCCTCTTAATAACCCTACCACCAATCATCTCCAAGAAGCTGAAGTGTGGACACTTTGCAGAATATTCAAAAGAATCCCATCCTACAGAAAATACACACCAACTTCCAAAGACACAAGAAAAGCAACACCAACAACAGATTTAGCCAACTGTAAAACACTAGAATTCGACAAATACCACTACAACAACAACAAGCCTTATAGCTCAACTTGTTTCAGATCATCATCTTCCTCACTAGACTCTATCATCACTCATCAACTTGCAGATGAAAGAAGCCACTTTTTTCTGAGTCAGCTTGCAGCTAATCATCAAGCTCCTTCATCAATGGTGACTAATCAAAGCTATTATAACCACAGCTTCGTGAATCATCATCATCAGAATGTGGAAGATGTTCTTGCCAATGGTAATTGGGATGAACTCAGATCTGTTGTTCAGTTTTCTGCTGATGATCATCATCATTCCACTATGCTATGA 933 0.4137 MEDESSKMNNMVKNDEEEEEDEEKGMLPGFRFHPTDEELVGFYLTRKVQKKTLRIELIKHIDIYKYDPWDLPKASGSVDEKEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKSIYNNALTHCIGLKKSLVYYKGSAGKGTKTDWMMHEFRLPLNNPTTNHLQEAEVWTLCRIFKRIPSYRKYTPTSKDTRKATPTTDLANCKTLEFDKYHYNNNKPYSSTCFRSSSSSLDSIITHQLADERSHFFLSQLAANHQAPSSMVTNQSYYNHSFVNHHHQNVEDVLANGNWDELRSVVQFSADDHHHSTML 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0787 310 Gene3D NAC domain 35 181 IPR036093 GO:0003677|GO:0006355
Acco10g0787 310 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 23 260 - -
Acco10g0787 310 FunFam NAC domain-containing protein 35 35 181 - -
Acco10g0787 310 ProSiteProfiles NAC domain profile. 26 178 IPR003441 GO:0003677|GO:0006355
Acco10g0787 310 Pfam No apical meristem (NAM) protein 28 154 IPR003441 GO:0003677|GO:0006355
Acco10g0787 310 MobiDBLite consensus disorder prediction 1 28 - -
Acco10g0787 310 SUPERFAMILY NAC domain 24 177 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0787 Acco-ChrAcco10 21025092 21031480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0787 11 178 NAC Transcription Factor Family AT5G39820 57.368 1.45e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco10g0787 NAM 1.5e-35 No_clan