Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0780 ATGATGGATAATGCAAACGAAGCATCCTCCTCCTTGAGTTTTGCATCATCTTACTTATCAAATGGGTCAAGTAATCCCAACATATCTGCCTGTCCTAGCCATGAGCTTGTGGCAAATCTTGAAAATTTGAGCCTCAGTAAGCTGAGTGGAAGCCTTGAGAAGCTACTGATGATAGATCCTGAATATGACTATAGTGATGTTGATATTGTTGTTGAGGGCAAACCTGTGGGTGTTCATAGGTGTATATTGGCTTCACGTAGTCAGTTTTTTCATGATCTTTTTAAGAAAGGAAAGGATGGCTCAGTGAAGGAAGGTAAGCCAAAGTATCTCATGTCAGACCTGGTGCCTTATGGCTTCGTTGGACATGAAGCGTTCTGTGTTTTCTTGCATTATTTGTATACTGGAAAGATGAAGGCGTCACCCCCACAAGAATCAACATGTGTTGATGAATCATGTGTACATGATGCATGCTGGCCTGCTATTAATTATGCTTTAGAGCTAATGTATGCTTCTGCCACGTTTAAGATGAAAGAGCTTGTTTTACTTGTGCAGAGGCGGCTCCTCGATTTTGTTGAGAAGGCTCTTGTAGAAGATGTGATTCCTATTCTTATGGCTGCCTTCCACTGCGAACTAGATCATCTGCGGTCACACTGCATCCAAAGATTAGCAAGTTCTGACCTTGAGAACACAACTTTGGAAAGAGAGCTCCCACCTGATGTTTTTAGCGAAATCAAATCACTCCGACGCAAAGCTCTGGCAGAATTCACTCCTAATGCAATGGAAGTCGAACCTTCAAATGAAAAAAGTATTAGGAGAATCCTTAAAGCGTTGGACTCTGATGATATCGAGCTGATGACTCTTCTTTTGAAAGAGTCTAGTGTCAATCTAGATGATGCTTATGCCCTTCACTATGCCTGTGCCTATTGTGATCCTAAGATTGTTAAAGAAGTTCTTAATCTTGGGTTGGCTAAAATAAACCATACAAATCGCCGAGGGTATGCAGTTCTTCATGTGGCCGCAAGGCGCAAAGATCCTACAATTTTAGTGGCACTGTTGACCAAAGGAGCCTGTGTATCAAATATCACACCAGATGGACGAACAGCTGTTGCGATTTGCCGGAGGATGACGAGACCCAAGGATTATAATGAGATAGAAGAACGGGGCAAGGAATCTAACAAAGACAAGCTCTGTGTTGATCTCCTGGAGAGAGAAATGAGAAGGACTTCAATGTCTGTGAATGCGTCTGTTTCATCCGAGTTAACTGCTGATGATTTGCATATGAAACTTGATTACCTGGAAAATAGAGTTGCTTTTGCTAGGCTGTTGTTTCCTGCTGAGGCTAAGGTGGCCATAGAAAATGCTGAGGTTGAGTCGACATTATACTCAAACCCACCGAGAGGCTCAAATGACAACCTAAGAGAGGTTGATCTAAATGAAACTCCTTCTATGAGAACCAGAAAACTGCAGTTAAGACTGCAATCCCTTCTGAAAACAGTTGAGAATGGCCGGCGCTTCTTTCCCCATTGCTCTGACGTTCTTGATAAGTTTCTGGAGGACGATATGCTGGATTTTTTCTTCTTAGAGAAGGGTAGCGAACAAGAACAGAGAATCAAGAAGCAACGCTTCATGGAGCTTAAAGAGGATGTGCAGAAGGCATTTCATAAGGATATGGCTGAAAACAATGGTTCAGGTTTTTCCTCAGTTTCTTCGTCGTCATCCTCAACTAAGAAAGGAGGTCTCAGCCAAAGAGTTAGGAAAAAGTGA 1764 0.424 MMDNANEASSSLSFASSYLSNGSSNPNISACPSHELVANLENLSLSKLSGSLEKLLMIDPEYDYSDVDIVVEGKPVGVHRCILASRSQFFHDLFKKGKDGSVKEGKPKYLMSDLVPYGFVGHEAFCVFLHYLYTGKMKASPPQESTCVDESCVHDACWPAINYALELMYASATFKMKELVLLVQRRLLDFVEKALVEDVIPILMAAFHCELDHLRSHCIQRLASSDLENTTLERELPPDVFSEIKSLRRKALAEFTPNAMEVEPSNEKSIRRILKALDSDDIELMTLLLKESSVNLDDAYALHYACAYCDPKIVKEVLNLGLAKINHTNRRGYAVLHVAARRKDPTILVALLTKGACVSNITPDGRTAVAICRRMTRPKDYNEIEERGKESNKDKLCVDLLEREMRRTSMSVNASVSSELTADDLHMKLDYLENRVAFARLLFPAEAKVAIENAEVESTLYSNPPRGSNDNLREVDLNETPSMRTRKLQLRLQSLLKTVENGRRFFPHCSDVLDKFLEDDMLDFFFLEKGSEQEQRIKKQRFMELKEDVQKAFHKDMAENNGSGFSSVSSSSSSTKKGGLSQRVRKK 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0780 587 SMART BTB_4 65 191 IPR000210 GO:0005515
Acco10g0780 587 Pfam Ankyrin repeats (3 copies) 280 357 IPR002110 GO:0005515
Acco10g0780 587 MobiDBLite consensus disorder prediction 560 579 - -
Acco10g0780 587 FunFam regulatory protein NPR3-like 265 405 - -
Acco10g0780 587 Gene3D - 266 405 IPR036770 -
Acco10g0780 587 MobiDBLite consensus disorder prediction 553 587 - -
Acco10g0780 587 SUPERFAMILY Ankyrin repeat 266 375 IPR036770 -
Acco10g0780 587 Gene3D Potassium Channel Kv1.1; Chain A 29 223 IPR011333 -
Acco10g0780 587 Coils Coil 577 587 - -
Acco10g0780 587 Pfam BTB/POZ domain 63 140 IPR000210 GO:0005515
Acco10g0780 587 ProSiteProfiles BTB domain profile. 65 141 IPR000210 GO:0005515
Acco10g0780 587 PANTHER REGULATORY PROTEIN NPR3 13 578 IPR044292 GO:0009862|GO:2000022|GO:2000031
Acco10g0780 587 SMART ANK_2a 297 327 IPR002110 GO:0005515
Acco10g0780 587 SMART ANK_2a 331 360 IPR002110 GO:0005515
Acco10g0780 587 FunFam Regulatory protein NPR3 38 223 - -
Acco10g0780 587 Pfam NPR1/NIM1 like defence protein C terminal 373 572 IPR021094 -
Acco10g0780 587 CDD BTB_POZ_NPR_plant 56 178 - -
Acco10g0780 587 Pfam Domain of unknown function (DUF3420) 226 274 IPR024228 -
Acco10g0780 587 SUPERFAMILY POZ domain 55 189 IPR011333 -
Acco10g0780 587 MobiDBLite consensus disorder prediction 460 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0780 Acco-ChrAcco10 20795219 20798867 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Acco10g0780 NPR1_like_C 5.5e-81 No_clan