Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0761 ATGAAGAACAATTGTCAGCAGAGAAACCGCGTCCGGCAGTACCACAAATCCGAGCTTCCCCGGCTCCGGTGGAAGCCGGAACTCCACCGCCACTTTGTTGATGCTGTTAAATCCCTCGGTGGTCAAGATAAGGCAACGCCGAAGCGAATTTTGCAGATGATGCGCGTGAAAGGATTGAGGATTTCCCACGTTAAGAGCCATCTTCAGATGTACAGAAAAATGAAGGGGTATTCCATTATGTCACAAGTTCATCATCATCATAATCATCAAGCACTTAAAGGAAAAGCTCATCAAGCTCGTGCTAATAATGATCTTCATACCTCCTGCATTTACTTACCCCAAAGATCGCCTGGAGCAAAAGTTTTAACGTCAATATATAACAATAGTGTGAAGAGAGAACTGCATCCTTTGGGTTTCAAAGGCCTTTCAGAAAGCAGTGAAGAATTTTATTATGATCTAAATCAGGAGCCTTATACAACGACAAGTACAGACAATAGTGGGACTGCTCCATTTGGTGACCATTCATTCTCTTTTGATCACACACATCTGCTTCCAGTAAACACCATGCAGAGTGTGCAAGATGAAGAAGACGGTCATGGCGATGATGACGACGAAAAAGAACAAGTCGTTCATGACTCTACTAGTTCAACACAGTCTCGTGGAGGGAATTACATAAACTTAGACCTAACTATTTGA 696 0.4296 MKNNCQQRNRVRQYHKSELPRLRWKPELHRHFVDAVKSLGGQDKATPKRILQMMRVKGLRISHVKSHLQMYRKMKGYSIMSQVHHHHNHQALKGKAHQARANNDLHTSCIYLPQRSPGAKVLTSIYNNSVKRELHPLGFKGLSESSEEFYYDLNQEPYTTTSTDNSGTAPFGDHSFSFDHTHLLPVNTMQSVQDEEDGHGDDDDEKEQVVHDSTSSTQSRGGNYINLDLTI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0761 231 NCBIfam myb-like DNA-binding domain, SHAQKYF class 20 73 IPR006447 GO:0003677
Acco10g0761 231 SUPERFAMILY Homeodomain-like 20 73 IPR009057 -
Acco10g0761 231 MobiDBLite consensus disorder prediction 191 231 - -
Acco10g0761 231 MobiDBLite consensus disorder prediction 212 231 - -
Acco10g0761 231 Gene3D - 19 76 - -
Acco10g0761 231 FunFam Myb family transcription factor 18 76 - -
Acco10g0761 231 Pfam Myb-like DNA-binding domain 22 72 IPR001005 -
Acco10g0761 231 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 5 100 IPR046955 GO:0003700
Acco10g0761 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 76 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0761 Acco-ChrAcco10 20618909 20626985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0761 6 75 G2-like Transcription Factor Family AT2G42660 64.286 2.75e-25 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco10g0761 Myb_DNA-binding 5.8e-06 CL0123