Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0721 ATGACCCTTTTCTTTGGGAGAAAAGAGTATATAATTCTGAACGCGCAAAACATTTCTTCCGATGATTACTCGTTGCTGATTGGGACGAACAGGTCTTCTTCTGCCCTCTATCTAACTTTCTCTCTCCCCTCCCTTGGTTCGGGGTTTGGGATTTCACGGTTCTATGCCTCGAATCTTATTCTGTATTTAGATTTCTCGTCTTTCATTTTTCTCCCCAAATCCTTTGGTAAGTTAATTCTCTTGATTAGTGACTTTGAAGTTCTTCTGGTCGTTGGAGTAGATGGATTTCGGTTAATTGATTCGTTCTTAGGTTTTGCAATCCCTAATTTGAAAGTTTTGTGCCATGAAGCTTGTGAAAGAGAAGGGATGTCAAGTGGAGCAACGCACTGGTGTTATACATGCAGACGGGAAATCATACCTGAAGGGAGAGATTTCACATGCCCTTACTGTGGTGAGGGCTTTGTGGTAGAACTCGACGAGGTGCAAAGAATGGCACACACGGAGGATTTTCATCAAGCACCGGACATTTTTGGTGCTATTCAAGCTGTTATGGGGAGGAGATTCCCAGAAACAAGATTTCCAGATTCAGTTGATATCCTGAGGCAGAGAATGGCTGGACGAAACCCGAACTTTGATGTTAGAGGGCGATCTATATCTGCCATTGGTCCTGATCAGAGTTGGGGTTTTATTAGTTCTGGTCCATACTTGATAGTTCATGGTCAGGTTCCTGGATTCACCTTGACTAATGGCATCCCTAGAAGCGGTCCTAGGCGTGTTGATGTTAGTGACTACTTCATGGGGCCTGGATTGGAAGAACTTATTGAACAGCTCACTATGAATGACCGGCACGGTCCAGCCCCAGCCTCGCGTTCTTCAATTGATGCAATGCCTACCATAACAATCACACAAGCTCATCTTCGTTCTGACTCTCAATGTCCGGTTTGTCAAGACAAATTCGAACTTGGCTCTGAGGCAAGGGCGATGCCATGTGCCCATATTTATCATTCTGATTGTATTGTCCCTTGGTTGGTTCAACATAACTCATGCCCTGTTTGCCGTGTTGAGTTGCCGCCTCATGGACAGGTTAATCCTCATGCTAGTCATAATTTTGGAGGAAGTAATGCAGAAAGCACCGACAATGATAGCTTTAGGGAAAGAGAGAATAGCCAACAGAACCAAGGAAGGAGAAACCCATTTTCTTTTTTGTGGCCATTCCGTTCTTCTAGCGCAAACAGTAATAATCAATATGCTGAGACCAGAGGAAGCAATAATTCTTCAAACAGTCGTGACCAGAATAATAATGGAACGAACCATAGCCGATGGCGCTTTGATGGATGA 1338 0.441 MTLFFGRKEYIILNAQNISSDDYSLLIGTNRSSSALYLTFSLPSLGSGFGISRFYASNLILYLDFSSFIFLPKSFGKLILLISDFEVLLVVGVDGFRLIDSFLGFAIPNLKVLCHEACEREGMSSGATHWCYTCRREIIPEGRDFTCPYCGEGFVVELDEVQRMAHTEDFHQAPDIFGAIQAVMGRRFPETRFPDSVDILRQRMAGRNPNFDVRGRSISAIGPDQSWGFISSGPYLIVHGQVPGFTLTNGIPRSGPRRVDVSDYFMGPGLEELIEQLTMNDRHGPAPASRSSIDAMPTITITQAHLRSDSQCPVCQDKFELGSEARAMPCAHIYHSDCIVPWLVQHNSCPVCRVELPPHGQVNPHASHNFGGSNAESTDNDSFRERENSQQNQGRRNPFSFLWPFRSSSANSNNQYAETRGSNNSSNSRDQNNNGTNHSRWRFDG 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0721 445 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 275 359 IPR013083 -
Acco10g0721 445 SUPERFAMILY RING/U-box 292 360 - -
Acco10g0721 445 CDD RING-H2_RNF126-like 311 353 - -
Acco10g0721 445 FunFam E3 ubiquitin-protein ligase RING1-like 276 359 - -
Acco10g0721 445 ProSiteProfiles Zinc finger RING-type profile. 312 353 IPR001841 -
Acco10g0721 445 SMART ring_2 312 352 IPR001841 -
Acco10g0721 445 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 249 357 - -
Acco10g0721 445 MobiDBLite consensus disorder prediction 392 445 - -
Acco10g0721 445 MobiDBLite consensus disorder prediction 363 445 - -
Acco10g0721 445 Pfam Ring finger domain 311 353 IPR001841 -
Acco10g0721 445 Pfam zinc-ribbon 128 158 IPR039525 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0721 Acco-ChrAcco10 19113088 19116417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0721 256 357 C3H Transcription Factor Family AT5G01980 43.269 2.27e-23 100