Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0715 ATGCCTACCACCAACATGATGGGAAAACTTATCTTTCATTTCTCCTTCATGTTCTTCGTGGTTTGCCCATGTTTATCTCACTTCAATTTTACAAATTCCGATAAATTGGCGCTTCTTGCTTTCAAATCATCTGTTAGGGATCCTTACAATCACTTGGAAAACTGGTCCAATTCCTCTTCCATTTGCAACTGGTCTGGGATTACATGTGATTCTACGCATGAGAGAGTGAGAATACTGAGTCTTGAAAAGATGGGTCTCCACGGAGCCTTACCAAAAGAGTTGCTTCAGTTGCAGAGGTTAGAAATTCTGAACTTGAGCTACAATGGATTCACTGGAGAAATCCCAAGTTGGATAGGAAGCTTATTTACTCTTCAACACTTGGTTCTTGGAAATAATAGCTTTGAAGGTTTCATTCCTCCAACTATTTCCAATTTGTCTAAGTTGGAGACCTTGGATTTGAATTCTAATTCTCTCCAGGGATCTATTCCCTTTAATATTGGAAGGCTTCAACATCTCAAAATCTTACGCCTTTCTGTGAACAAGCTTTCAGGAACTATACCTCCAACTATTTCTAACTTATCCTCACTTGAGTGGCTTTCTTTGTCTCTCAACGACTTGCAAGGACATATTCCCATAGATATGAATAAGCTTACGAAGCTGAAATTAATATACTTGGAAGGTAATAAGTTGACTGGCCAAATACCAAGAAGTATTGGAAACTTGATCATGCTTCAAGAATTATATCTTGACCACAATAACTTGCAAGGAGATATTCCCAACGAAATTAGCAATCTTACAAGTGCGAATAAAATATACTTGACTGAGAATCAATTGTCTGGCCACATACCAAAAAGCATTGGAAAGCTGACTATGCTTCAAGAGTTGTCTCTTGCCAATAATAACTTAGAAGGAAATATTCCCAACGAAATTGGAAGCCTGACAAATTTGAAAATTATAAACCTATCGGTTAATAAACTATTTGGCCATATACCAAGAGGGATTGGGAACTTGACTATGCTTCAAGATTTAAATCTTGAAAGCAATCATTTAGAAGGCTCAATACCTAAGGAAATAGGCTATCTTGAACAGCTTAAAACTTTATCCTTGTATCAAAACCAGTTGAGCGAATCAATTCCATCAGAAATTTTCAACATCTCAACTTTGAAAGCCTTATCTCTCCAAGACAATTCTCTAATTGGAAGTCTTCCATCAAATTTTGGATATGGCCTTTCTAATCTACAAATGTTGTATTTATGGGGCAACAAACTTTCCGGAAGCATCCCAAATACCATATCCAATGCTTCGAAGCTAACCGTTCTAGAGTTGGAGCAAAATAATTTTGAAGGGGTTTTACCAAGTACACTTGGGCATTTAAGATACTTAGAAACCCTTCAAGTATATGGTAACAATTTCACCATAATAGATGCTTCAAATTCTGGAACTGGCTTTTTTAGCTCGTTGTCAAATTGTAGACATTTGGAAACTCTGGTTCTCTCAAAGAATCCATTGCATATGAAACTTCCCAAGTCCGTTGGAAACTTGTCTGATTCTCTTCAGACGCTGGATATGGACTCTTGCGAGATTAATGGTAACATACCATCAGAAATTGGGAATCTGTCTAGCTTGTTTGAGCTATCTTTTGCTGAAAATTTTTTAAATGGATCAATTCCTCGAACAATTAGCAACTTACAGGCTCTTCAGCGTTTGAATCTTGTGGGCAATGAGCTAGACGGTTTGATTGTTGATGAGTTTTGTGAGATTAGAAGACTTGCATATTTATATCTATCTCGAAACAACTTTTCTGGAGCAATGCCACCTTGCTTAGGAAACCTTATGTCCCTGCAAGAACTTGACTTGAGCTCCAACAAGTTGATTTCCGAGATACCATCTTCCTTTTGGAATTTGACAGGTATACTACAAGTAGACCTATCTCACAACATGTTAGTTGGAAATCTTTCATTGAAGATTGGGAACATGAAAGCTCTTGTTCTATTAAATCTTTCAGGAAATCATATTTCAGGCATCATTCCCCCAACCATAGGTAACTTGCAAAATTTGCAAATTTTCTCTTTAGGAGGCAACATATTGCAAGGGTTGATCCCTGAATCACTTGGGGATTCACTAAGCTTAGAAAACCTAGACCTTTCCCAAAATTATTTGTCTGGTGATATTCCCAAATCGCTAGCATCACTTAGATCCCTTAAGTATGTCAACCTCTCTTGTAACCAACTGCAAGGTGAGATTCCAAGTGGCGGGGTCTTCAAAGATTTGACCGCTGAATCTTTCATGATGAATAAAGCACTTTGTGGTGAGCCAAAAATGCAAGTTCCTCCGTGCAGAAAAGAAAAAAGAAAAAGATCAATGGCAAAACTGATTTTGTTGAAATGCATACTACCAATAGTTTTGTCAACAATTTTGGTAGTTTCACTCGTTATCCGCTTTCAACGCAAACGAATGCATTCTACGCATACCATGGAACATGATTTATCATTTTTAAGAATGCCAAGAAGGATTTCCTATTTTGAGATTTTGGATGCTACCAATAGATTTGATGAGAGTAACTTACTTGGAAAGGGGAGTTTTGGTTCTGTGTTCAAAGGAAGGCTTTCAAGTGGAATAGTTGTTGCTGTTAAAATATTCAATTTTGATTCAGAAGCATTGTCAAGGAGCTTTGAAGTGGAATGTGACACAATGCGTAATATGCGTCATCGCAATTTGGTAAAGATTATAAGTAGTTGTTCCAATGATGATTTCAAGTGTTTGATAATGGAGTTCATCCCCAATGGAAGTCTTGAAAAATGGTTATATTCTCATAACTATTGTGTGGATTTTCTGCAAAGGTTAAATATAATGATAAATATTGCATCTGCTTTGGAATATCTCCATGAAGGCTTGCCAACACCAATAGTCCACTGTGATTTGAAGCCAAGTAACATTTTGTTGGATGATAACATGGTTGCTCATGTGAGTGACTTTGGAATTGCAAAGTTTTTAGATGAAGGGAGATCTAAGGTACATACAGAGACATTGGCTACAATTGGGTACATTGCACCTGAATATGGATCTGTTGGAATTGTTTCAACAAAAGTAGATGTGTACAGCTACGGAATAATACTAATGGAAGTATTCACCAGAAAAAGGCCAACAGAAGATATGTTTGTGGATGGATTGAGCTTGAAGAGTTGGGTAAGTGAATTAATGTCACCAACTTTATTAACTCAAGTCATAGATTCAAATTTATTAGAAGGAGATGAACAAAATATTAGTAATATTTTGACAACTACATCCTCTGTTCTTGAATTGGCCTTGAATTGTTGTGCCAACTCTCCACAAAGGCGTTGCAATATGTCACATGTTGTGGTTTCACTAAACAAGATCAAGGACTTGTTTATGCAAACTTGTCATTCGAAGAAATATTGA 3420 0.3684 MPTTNMMGKLIFHFSFMFFVVCPCLSHFNFTNSDKLALLAFKSSVRDPYNHLENWSNSSSICNWSGITCDSTHERVRILSLEKMGLHGALPKELLQLQRLEILNLSYNGFTGEIPSWIGSLFTLQHLVLGNNSFEGFIPPTISNLSKLETLDLNSNSLQGSIPFNIGRLQHLKILRLSVNKLSGTIPPTISNLSSLEWLSLSLNDLQGHIPIDMNKLTKLKLIYLEGNKLTGQIPRSIGNLIMLQELYLDHNNLQGDIPNEISNLTSANKIYLTENQLSGHIPKSIGKLTMLQELSLANNNLEGNIPNEIGSLTNLKIINLSVNKLFGHIPRGIGNLTMLQDLNLESNHLEGSIPKEIGYLEQLKTLSLYQNQLSESIPSEIFNISTLKALSLQDNSLIGSLPSNFGYGLSNLQMLYLWGNKLSGSIPNTISNASKLTVLELEQNNFEGVLPSTLGHLRYLETLQVYGNNFTIIDASNSGTGFFSSLSNCRHLETLVLSKNPLHMKLPKSVGNLSDSLQTLDMDSCEINGNIPSEIGNLSSLFELSFAENFLNGSIPRTISNLQALQRLNLVGNELDGLIVDEFCEIRRLAYLYLSRNNFSGAMPPCLGNLMSLQELDLSSNKLISEIPSSFWNLTGILQVDLSHNMLVGNLSLKIGNMKALVLLNLSGNHISGIIPPTIGNLQNLQIFSLGGNILQGLIPESLGDSLSLENLDLSQNYLSGDIPKSLASLRSLKYVNLSCNQLQGEIPSGGVFKDLTAESFMMNKALCGEPKMQVPPCRKEKRKRSMAKLILLKCILPIVLSTILVVSLVIRFQRKRMHSTHTMEHDLSFLRMPRRISYFEILDATNRFDESNLLGKGSFGSVFKGRLSSGIVVAVKIFNFDSEALSRSFEVECDTMRNMRHRNLVKIISSCSNDDFKCLIMEFIPNGSLEKWLYSHNYCVDFLQRLNIMINIASALEYLHEGLPTPIVHCDLKPSNILLDDNMVAHVSDFGIAKFLDEGRSKVHTETLATIGYIAPEYGSVGIVSTKVDVYSYGIILMEVFTRKRPTEDMFVDGLSLKSWVSELMSPTLLTQVIDSNLLEGDEQNISNILTTTSSVLELALNCCANSPQRRCNMSHVVVSLNKIKDLFMQTCHSKKY 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0715 1139 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Acco10g0715 1139 Pfam Leucine Rich Repeat 244 265 IPR001611 GO:0005515
Acco10g0715 1139 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 565 1124 - -
Acco10g0715 1139 Pfam Protein kinase domain 851 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0715 1139 SMART serkin_6 850 1130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0715 1139 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Acco10g0715 1139 Pfam Leucine rich repeat 387 447 IPR001611 GO:0005515
Acco10g0715 1139 Pfam Leucine rich repeat 588 648 IPR001611 GO:0005515
Acco10g0715 1139 Pfam Leucine rich repeat 685 744 IPR001611 GO:0005515
Acco10g0715 1139 Pfam Leucine rich repeat 171 230 IPR001611 GO:0005515
Acco10g0715 1139 SMART LRR_typ_2 313 337 IPR003591 -
Acco10g0715 1139 SMART LRR_typ_2 731 756 IPR003591 -
Acco10g0715 1139 SMART LRR_typ_2 611 634 IPR003591 -
Acco10g0715 1139 SMART LRR_typ_2 361 385 IPR003591 -
Acco10g0715 1139 SMART LRR_typ_2 193 217 IPR003591 -
Acco10g0715 1139 SMART LRR_typ_2 241 265 IPR003591 -
Acco10g0715 1139 SMART LRR_typ_2 289 312 IPR003591 -
Acco10g0715 1139 SMART LRR_typ_2 458 482 IPR003591 -
Acco10g0715 1139 SMART LRR_typ_2 410 434 IPR003591 -
Acco10g0715 1139 SMART LRR_typ_2 435 457 IPR003591 -
Acco10g0715 1139 SMART LRR_typ_2 145 169 IPR003591 -
Acco10g0715 1139 SMART LRR_typ_2 659 683 IPR003591 -
Acco10g0715 1139 SMART LRR_typ_2 97 121 IPR003591 -
Acco10g0715 1139 SMART LRR_typ_2 563 586 IPR003591 -
Acco10g0715 1139 Gene3D Ribonuclease Inhibitor 285 365 IPR032675 -
Acco10g0715 1139 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 926 1136 - -
Acco10g0715 1139 ProSiteProfiles Leucine-rich repeat profile. 613 635 IPR001611 GO:0005515
Acco10g0715 1139 SUPERFAMILY L domain-like 517 772 - -
Acco10g0715 1139 SUPERFAMILY L domain-like 260 557 - -
Acco10g0715 1139 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 31 190 - -
Acco10g0715 1139 FunFam Leucine-rich repeat receptor-like protein kinase TDR 204 472 - -
Acco10g0715 1139 Gene3D Ribonuclease Inhibitor 368 477 IPR032675 -
Acco10g0715 1139 SMART LRR_sd22_2 683 715 - -
Acco10g0715 1139 SMART LRR_sd22_2 289 323 - -
Acco10g0715 1139 SMART LRR_sd22_2 611 637 - -
Acco10g0715 1139 SMART LRR_sd22_2 145 166 - -
Acco10g0715 1139 SMART LRR_sd22_2 539 565 - -
Acco10g0715 1139 SMART LRR_sd22_2 169 195 - -
Acco10g0715 1139 SMART LRR_sd22_2 217 243 - -
Acco10g0715 1139 SMART LRR_sd22_2 410 436 - -
Acco10g0715 1139 SMART LRR_sd22_2 361 387 - -
Acco10g0715 1139 SUPERFAMILY Protein kinase-like (PK-like) 824 1123 IPR011009 -
Acco10g0715 1139 FunFam Serine-threonine protein kinase plant-type 831 925 - -
Acco10g0715 1139 ProSiteProfiles Leucine-rich repeat profile. 709 732 IPR001611 GO:0005515
Acco10g0715 1139 Gene3D Ribonuclease Inhibitor 185 284 IPR032675 -
Acco10g0715 1139 Gene3D Ribonuclease Inhibitor 30 184 IPR032675 -
Acco10g0715 1139 SUPERFAMILY L domain-like 32 303 - -
Acco10g0715 1139 Gene3D Transferase(Phosphotransferase) domain 1 926 1138 - -
Acco10g0715 1139 ProSiteProfiles Protein kinase domain profile. 850 1131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0715 1139 PRINTS Leucine-rich repeat signature 148 161 - -
Acco10g0715 1139 PRINTS Leucine-rich repeat signature 611 624 - -
Acco10g0715 1139 ProSitePatterns Serine/Threonine protein kinases active-site signature. 969 981 IPR008271 GO:0004672|GO:0006468
Acco10g0715 1139 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 486 783 - -
Acco10g0715 1139 ProSitePatterns Protein kinases ATP-binding region signature. 856 878 IPR017441 GO:0005524
Acco10g0715 1139 Gene3D Phosphorylase Kinase; domain 1 831 925 - -
Acco10g0715 1139 Gene3D Ribonuclease Inhibitor 478 788 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0715 Acco-ChrAcco10 18914230 18934002 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0715 10 1127 Receptor kinase-like Gene Family AT5G46330 35.017 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco10g0715 Pkinase 3.9e-45 CL0016