Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0709 ATGAGGAAGAAACTCGATACTCGTTTCCCTGCCGCTCGGATAAAGAAGATTATGCAATCGGATGAGGATGTAGGGAAGATTGCCATGGCCGTGCCTCTTCTTGTTTCTAAAGCACTAGAACTCTTTCTGCAAGATTTATGTGATCGGACATATGAAATAACATTGAGAAGAGGGGCAAAGACAATGAATTCCTTTCATTTAAAACAGTGTGTACAGACTTTTAATGTCTTCGATTTTCTGAAAGATATTGTCAGCAAGGTTCCTGATTTAGGTGGCCACACTGCTTCTGGAGATGACCGTACTATCTGTAAGAGAAGGAAAGTAGATGAAAATGGAAATGACAGTGACGATGACGATGACGCAAAAAGAAATAAGATGTCAGAAAATGCACATCATGCTGGTGGTAGGGGAAAAGGTCGGGGTAGAGGTAGGGGTCGTGGCCGAGGAAGCAGAACAGCAGATCGAGAGATTGGCACACACGTCAAGTCTGAAGATGATCATCAGTATACGGATGGAATGAAGTACCATCACATGCACACTCACAGCAATGAAAGCATGGAAATTAGTACAGAACATGAAGTGAAGCCTTCCATTGACAAGACATCAGAAGCATGCTTTAAAAATTTCGACTTAAATATGGATCCTGTGGACGTGGACGAGGATGGGGATTCGCCAACCAGCAAAGCTCCTGTCCCACCTTGTCCATACGAAAAGCCTACCACAAAAACTTCTGAAAAACCAGCCACAACTTGTCCATCTCAAAAACCAACCGTAGAATTGAAACACGAAGAAATTGCTGGGTGGTCGTTGTCTGATGTGGAAAAAATGGCCATTGATCCTATCCAACTGGTCACCATGAATAAAAGGATGGATGAAGAAGATGAAGATTATGATGAAGAAAGTTGA 906 0.426 MRKKLDTRFPAARIKKIMQSDEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAKTMNSFHLKQCVQTFNVFDFLKDIVSKVPDLGGHTASGDDRTICKRRKVDENGNDSDDDDDAKRNKMSENAHHAGGRGKGRGRGRGRGRGSRTADREIGTHVKSEDDHQYTDGMKYHHMHTHSNESMEISTEHEVKPSIDKTSEACFKNFDLNMDPVDVDEDGDSPTSKAPVPPCPYEKPTTKTSEKPATTCPSQKPTVELKHEEIAGWSLSDVEKMAIDPIQLVTMNKRMDEEDEDYDEES 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0709 301 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Acco10g0709 301 MobiDBLite consensus disorder prediction 104 170 - -
Acco10g0709 301 MobiDBLite consensus disorder prediction 242 256 - -
Acco10g0709 301 MobiDBLite consensus disorder prediction 219 257 - -
Acco10g0709 301 MobiDBLite consensus disorder prediction 147 170 - -
Acco10g0709 301 FunFam dr1-associated corepressor homolog 1 86 - -
Acco10g0709 301 MobiDBLite consensus disorder prediction 104 135 - -
Acco10g0709 301 SUPERFAMILY Histone-fold 4 88 IPR009072 GO:0046982
Acco10g0709 301 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Acco10g0709 301 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0709 Acco-ChrAcco10 18738889 18741958 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0709 1 118 CCAAT-HAP5 Transcription Factor Family AT3G12480 70.400 3.25e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Acco10g0709 CBFD_NFYB_HMF 1.4e-18 CL0012