Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco10g0646 | ATGGCGACGATCAGCCTCCGCAAGGGTAACACTCGACTGCCGCCGGAGGTAAATCGCGTTCTCTATGTTCGTAACCTACCCTTCAATATCACCAGCGAGGAGATGTACGATATCTTTGGCAAGTACGGGGCGATTCGGCAGATTCGCATTGGCACCAACAAGGACACTCGTGGCACCGCCTTCGTCATATACGAGGACATATACGACGCCAAAACCGCCGTCGATCACCTCTCCGGCTTCAACGTTGCCAATCGTTACCTGATTGTGCTTTATTACCAGCAGGCGAAGATGGGCAAGAAGTTCGATCAGAAGAAGAAGGAGGAAGAGATTGCTAAGATGCAAGAGAAGTACGGGGTCTCCACCAAAGATAAGTAG | 375 | 0.512 | MATISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFVIYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMGKKFDQKKKEEEIAKMQEKYGVSTKDK | 124 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco10g0646 | 124 | Gene3D | - | 15 | 121 | IPR012677 | - | |
Acco10g0646 | 124 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 19 | 94 | IPR000504 | GO:0003723 | |
Acco10g0646 | 124 | FunFam | splicing factor 3B subunit 6-like protein | 15 | 118 | - | - | |
Acco10g0646 | 124 | CDD | RRM_SF3B14 | 17 | 93 | IPR034150 | - | |
Acco10g0646 | 124 | SUPERFAMILY | RNA-binding domain, RBD | 7 | 101 | IPR035979 | GO:0003676 | |
Acco10g0646 | 124 | SMART | rrm1_1 | 20 | 90 | IPR000504 | GO:0003723 | |
Acco10g0646 | 124 | PANTHER | RNA-BINDING MOTIF PROTEIN, X-LINKED 2 | 21 | 109 | - | - | |
Acco10g0646 | 124 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 21 | 87 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco10g0646 | Acco-ChrAcco10 | 17384282 | 17384656 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco10g0646 | 21 | 109 | Eukaryotic Initiation Factors Gene Family | AT2G36660 | 32.967 | 3.08e-07 | 45.8 |