Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0642 ATGACCATAAGTTACATGGCTGAGCGTGTTGTTGGACAAGGCTCATTTGGTATTGTGTTTCAGGATGACGGTAAACTCATGGAAGAGAGAGAAATGAGTTTGAATTCTAACATTGATCATCCTAATGTTGTGTCACTCAAACATCGCTTCTTTTCCACCACAGATAAGGATGAACTATATCTCAACTTGATTTGCAGAGCTCTGGCTTATATTCATGGATGTGTCGGGGTGTGCCACAGCGACATTAAACCTCAGAACCTTCTGGTTAATCCTCACACTCATCAGGTCAAGCTTTGTGATTTTGGAAGTGCAAAAGTTCTGGTCAAAGGTGAACCCAATATATCGTATATTTGCTCTCGTTACTACCGAGCACCTGAACTCGTTTTTGGGGCAACTGAATATACAACTGCAATTGATATGTGGTCTGTGGGTTGTGTCCTGGCTGAGCTGCTCCTAGGACAGCCTCTATTCCCTGGGGAAAGTGGTGTTGATCAGCTTGTTGAGATTATCAAGGTAAGTTCATTTGTGGCCTTATTTGTGAACTCACCTAGACTATCCAAGGTGCTTGGGACGCCGACTCGTGAGGAGATAAAATGCATGAACCCAAACTATACTGAGTTTAAGTTTCCTCAAATCAAGGCGCATCCTTGGCATAAGATATTTCATAAGCGTATGCCCCCAGAAGCAGTATATCTTGTTTCCAGACTCCTCCAGTACTCACCAAATTTACGATGCACTGTGCTGATGTTCAGTTGCTTGTCTGGTATATATGAAATTGAAAGGAATGGAGGGAGAGTAGTGAAAAACTGA 810 0.4272 MTISYMAERVVGQGSFGIVFQDDGKLMEEREMSLNSNIDHPNVVSLKHRFFSTTDKDELYLNLICRALAYIHGCVGVCHSDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELVFGATEYTTAIDMWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVSSFVALFVNSPRLSKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVYLVSRLLQYSPNLRCTVLMFSCLSGIYEIERNGGRVVKN 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0642 269 Gene3D Transferase(Phosphotransferase) domain 1 46 257 - -
Acco10g0642 269 ProSiteProfiles Protein kinase domain profile. 1 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0642 269 CDD STKc_GSK3 2 246 IPR039192 -
Acco10g0642 269 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 2 64 - -
Acco10g0642 269 FunFam Shaggy-related protein kinase kappa 53 262 - -
Acco10g0642 269 SUPERFAMILY Protein kinase-like (PK-like) 5 247 IPR011009 -
Acco10g0642 269 SMART serkin_6 5 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0642 269 Pfam Protein kinase domain 58 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0642 269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 77 89 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0642 Acco-ChrAcco10 17355249 17358798 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0642 5 247 Core Cell Cycle Gene Families AT1G73690 31.186 1.96e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Acco10g0642 Pkinase 3e-38 CL0016