Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0616 ATGACGGACCTTTTGGGCATTTTATTGTGTTTCGGTCTTTCTTTGTGGGTATCAGAATTATTCTTCGGCATCTTGCGCTCTCCTCTCCTCTCTCTCTTCGGATCTTTCTTTTTCTTCTTGGCCCGTCTTCATTTACAATCTATTCTTGTTGTGAAGGCTTCAGCAGCACATACATCCAGTAGCTTCTGCGAATTTTATCCCATAAACGAACCTTTTGGATCTGTTACTATGACTTCAGTCTTGAAAATCGAAGGCGAACAGATCCCCGCCAACGATTTTCAGGATTTGTCCCTCCAGGATAAGACTGAAATGCGAAGTGAAGCAGAGATCCTCCAGGTGGGATCTGAGAACCATGGGGGAATCTGTGCGATTTGTCTGGATAAGATAGTTCTGCAGGAAACTGCGCTCGTTAAAGGTTGCGAGCATGCTTACTGCGTAACATGCATTCTTCAATGGGCCACTTATCGCCCCAAGGTCACCTGCCCTCAATGTAAACATCCATTTGAGTTTCTTAATTTGCATCGCTCACTTGATGGCAGGCTTCATGACTACATGTTTGAGGAAAGTGTCTGCCTACTTCTTAGAGCTTCATGGTTTAAACCTTTGAATGTAGAAGATCATGCTCAGCATGAAGAGGTGTATATGTATGATGACCTTGAAGATTATTATTATGAATACGAGGACGAAGATGATTTGGATGAAGATTATTATGGTGGATCATCTAGCATCCGCATTGGCAACCGGAGGTGGGGAGACAATGGCTATGTCAGGGCTGGTCGGCAACAAGCTAGGCCTGTCCATCATCATAACTCCCAGAACTCCGGGGCAAGTTCATCTGCTGGGCCAAAGAACAAAGAGGTTGCCAAAGGTGCAGCAAGTGGACGACGAGCGAAGCGAGCACAGAAACGGGAGGCGGCAGATAAGGCTGCTGCGGTGAAGCATCAGCAGCATCTAGTGAGGTTGGGAAGGAAGTGA 975 0.4626 MTDLLGILLCFGLSLWVSELFFGILRSPLLSLFGSFFFFLARLHLQSILVVKASAAHTSSSFCEFYPINEPFGSVTMTSVLKIEGEQIPANDFQDLSLQDKTEMRSEAEILQVGSENHGGICAICLDKIVLQETALVKGCEHAYCVTCILQWATYRPKVTCPQCKHPFEFLNLHRSLDGRLHDYMFEESVCLLLRASWFKPLNVEDHAQHEEVYMYDDLEDYYYEYEDEDDLDEDYYGGSSSIRIGNRRWGDNGYVRAGRQQARPVHHHNSQNSGASSSAGPKNKEVAKGAASGRRAKRAQKREAADKAAAVKHQQHLVRLGRK 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0616 324 CDD RING-HC_Topors 122 168 - -
Acco10g0616 324 ProSitePatterns Zinc finger RING-type signature. 140 149 IPR017907 -
Acco10g0616 324 SMART ring_2 122 164 IPR001841 -
Acco10g0616 324 MobiDBLite consensus disorder prediction 260 324 - -
Acco10g0616 324 Pfam Ring finger domain 122 165 IPR001841 -
Acco10g0616 324 SUPERFAMILY RING/U-box 121 171 - -
Acco10g0616 324 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 99 185 IPR013083 -
Acco10g0616 324 ProSiteProfiles Zinc finger RING-type profile. 122 165 IPR001841 -
Acco10g0616 324 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 77 324 - -
Acco10g0616 324 MobiDBLite consensus disorder prediction 265 281 - -
Acco10g0616 324 MobiDBLite consensus disorder prediction 289 314 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0616 77 324 C3H Transcription Factor Family AT5G19430 56.420 2.05e-85 256