Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0612 ATGGAAGAATCAGGAAAATTGCAATCTGAAGAGAATAAAGGCTCTATGGAGACAAATAAGAAGAGAAAACTCAAAACACCTGCTCAGGTTTATGCCTTGGAGAAATTTTATAATGAGCACAAATATCCCACTGAGGAAATGAAATCAGAACTTGCTGAGGAGTTGGGGTTGACTGAAAAACAAGTATCTGGATGGTTTTGCCATCGAAGGTTAAAAGATAAGAGACTGTTGAAAGATGAAGCTTGTGCTAATGGGCGGCAAGATATTTCAAGTGGTGTTGTCCAAGACCATGGAAGTGGACTAGGGCAAGATTCATGTGGAAGCACCAAACATGGTGATTATAGGCATCTTGATCCCAAAGAGGTCGAGAGTCATGGCCTTTATGGTGGTCATGATCTTTTAGTTTCAGATATGGCCTTTGAACGTAGGAATCATTATTCTGAAAATGTTTGTGCCATGGATGACACATCATCTGAGAGCAGCTCATATTTGCAAGATAAGGACTCGTATGATGCTGAGCCTTCTGGTTATCCAATACCTAATGGAGCTCTTCCGACTAAAATTCCCAAGGCTGCTACGAACATGAGATATAAACCATCAGGCTATCTTAAAGTAAAAGGAGAGATTGAAAACCCTGTTATAACTGCTGTTAAGAAGCGATTAGGAAGAAATTATCGTGAAGATGGTCCGCTACTTGGTATAGAATTTGATCTACTTCCTCCTGGGGCATTTGAGTGTAAAATTGCAGATCCATTTCATGAAACATACTATATGGCAAGTCGTGCTGTTAACTGCTCTCCTGAAATTTCTGCTTTTAAAAGGCAACTCAGTCTTTCTGCTAGATATGATTTGTATAATGCCAAATTCAATTCCCAAGATTCACATATGGAAGGAGAAGACCTCGCTGATTTCCAGGATAAGAAACCTCATCAGCATTCAAAGCAAAGACCACCTTTGTACAGTCATACCTTTCGATTGCCTAGCAGAAACTCTACTCTGGATTTGTACGACCATCCTGTTAGAGAAGCACCTGCGAATAATAGCAGAGAGAATTGTAGAGTTGGCATCAAGCATGGCTTTGAAGGTTTGAAATCTGATTCTGCTTCTAATCACAGTGACCACTATGATGGTAAACTTGCAGCAAATCCAAAAGACTCTCTGTTGCATGGATATGATTATGTCAATTCGAAGAATGTTCAGAGTGAATATGTAAACCTTATGCCTTCAAAGCCAATCAGTAATCCTTTTGTTTCTATGGATACAAAAAATAGAGGAGGCATATCCGGTAGGATGATAAAGGAAAAGAAATCTAGTGAAAGAAGAAAGGCAAGAAAGCAATGTGATGATCCAGACGCACTAAGGATGCTTTTGCATGAGGCTGCAAACTGTGTCGATCCACCTCTTCAATACAATGTTAAAGAAGATCATATTGCTGAGATGCAACCACATAAAGTCCTGAGATCTTCCATGGAAGTGTCATCTAGCTTTAGCGAGGATGAAACTGTGAATCCCAGCTCGTCTCTTGATGAAGCAATCGGTTGTCATTAA 1548 0.3986 MEESGKLQSEENKGSMETNKKRKLKTPAQVYALEKFYNEHKYPTEEMKSELAEELGLTEKQVSGWFCHRRLKDKRLLKDEACANGRQDISSGVVQDHGSGLGQDSCGSTKHGDYRHLDPKEVESHGLYGGHDLLVSDMAFERRNHYSENVCAMDDTSSESSSYLQDKDSYDAEPSGYPIPNGALPTKIPKAATNMRYKPSGYLKVKGEIENPVITAVKKRLGRNYREDGPLLGIEFDLLPPGAFECKIADPFHETYYMASRAVNCSPEISAFKRQLSLSARYDLYNAKFNSQDSHMEGEDLADFQDKKPHQHSKQRPPLYSHTFRLPSRNSTLDLYDHPVREAPANNSRENCRVGIKHGFEGLKSDSASNHSDHYDGKLAANPKDSLLHGYDYVNSKNVQSEYVNLMPSKPISNPFVSMDTKNRGGISGRMIKEKKSSERRKARKQCDDPDALRMLLHEAANCVDPPLQYNVKEDHIAEMQPHKVLRSSMEVSSSFSEDETVNPSSSLDEAIGCH 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0612 515 MobiDBLite consensus disorder prediction 157 184 - -
Acco10g0612 515 SUPERFAMILY Homeodomain-like 19 85 IPR009057 -
Acco10g0612 515 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Acco10g0612 515 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 509 - -
Acco10g0612 515 MobiDBLite consensus disorder prediction 489 508 - -
Acco10g0612 515 Gene3D - 9 91 - -
Acco10g0612 515 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Acco10g0612 515 CDD homeodomain 20 75 IPR001356 GO:0003677
Acco10g0612 515 SMART HOX_1 18 80 IPR001356 GO:0003677
Acco10g0612 515 MobiDBLite consensus disorder prediction 489 515 - -
Acco10g0612 515 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0612 Acco-ChrAcco10 16855882 16860169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0612 3 509 Homeobox Transcription Factor Family AT4G03250 37.547 4.45e-80 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Acco10g0612 Homeodomain 1.2e-17 CL0123