Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0568 ATGATGCAATGCGGGTTCTTTTTCTGGAAATTCTTGGTTGCTTTAGGCTTAGCATGTGACGAGCATCTTTTCCTCCTGATGGATTCATTTGAGCCAAATGGAAATGGGAATGACGACAGTTTACCACCACCACCACCTCCGCCTCCTGAAGTCCCGCCAAATGTTGTTCCTGTGAAAGCGGAAGAACTCCCTACTGAACCGGTTAAGAAGAAGCCTTCTCGAGTTCCAATAGCCAGACGAGGGTTGGGATCCAAAGGGAGTAAACTGCAACTTCTCACCAATCATTTCAAAGTTGATGTCAATAACAAGGATGGTCATTTCTTCCATTACAGTGTAGCTCTTTTTTATGAAGATGGGCGGCCTGTGGAAGGTAAGGGTGTTGGAAGAAAAGTAATTGATAGGGTGCAGGAGACTTACTCTTCTGAATTAGCGGGAAAAGACTTTGCCTATGATGGCGAGAAGAGTCTGTTTACCGTTGGAGCTCTTCCTCGAAACAAACTTGAGTTTACGGTTGTTCTAGAGGATATCATATCAAACAGCCGAAATAATGGAAATTGCAGCCCTGATGGTCATGGAAGTCCAAATGAGGGTGACAGGAAGAGGATGCGACGCCCAAATCGGGCAAAAACGTTCAAAGTGGAGATTAGCTTTGCTGCAAAGATTCCTATGCAGGCCATTGCCAATGCATTACGTGGGCAGGAGACTGAGAATTTTCAAGAAGCAATAAGAGTTCTTGATATTATATTGAGGCAAAACGCTGCTAAGAAAGGCTGTCTTCTTGTTCGCCAATCCTTCTTCCACAATGATCCAATGAATTTTGCTGATGTAGGCGGTGGCGTTCTTGGCTGCCGAGGTTTTCATTCAAGTTTTAGGACCACACAGAGTGGCTTATCCCTCAATATTGATGTATCTACCACAATGATAATACAACCTGGGCCTGTGGTGGATTTCTTAATTGCCAACCAAAACGTGAGAGATCCTTATTCGCTTGACTGGGGCAAGGCTAAGAAGACTCTGAAGAATTTGAGGATTACAACAAGCCCATCCAATCAAGAGTACAAGATCTGTGGGCTCAGTGAACTCCCATGTCGTCAGCAGACGTTTACTCTCAAGGGTAAGGGTGGTGATGAGAGTGCAGAGGAAATAACTGTTTTTGATTATTTTTCAAAATATCGTAATATAGAGCTTCGGTATTCTGCTGATATGCCTTGCATTAATGTTGGGAAGCCAAAACGCCCAACTTATTTACCCATTGAGCTTTGCTCTTTGGTATCCCTGCAACGTTATACAAAGGCACTTACTACCCTACAAAGGGCATCATTGGTTGAAAAGTCTCGGCAGAAGCCACAAGAGAGAATGAGGGTTTTATCTGATGTTTTAAAAGTCAGCAAGTATGATTCTGATCCTATGCTACATAGTTGTGCTGTTCGAATAAATACTGGTTTTACACAGGTTGATGGCCGTGTTCTACCAGCCCCAAGGTTGAAGTTTGGCAATGGAGAAGAATTCAATCCGAGAAATGGGAGGTGGAATTTTAACAATAAGACATTTGCGCAGCCAACAAAGATAGAGCGATGGGCCGTGGCAAACTTTTCTGCGCGATGTGATGTGAAATCTCTTGTTAAGGATCTGATTAGATGTGCTGGAAACAAAGGGATTCAAATAGATCCTCCATTTGATGTATTCGAGGAAAGTCCGCAGTTTAGGCGTGCCCCACCTATGGTCAGAGTGGATAAGATGTTCGAAGATATACAGTCGAAACTTCCTGGAGCTCCTCAGTTCCTTCTCTGTCTTCTTCCGGAGCGGAAAAATTGTGATATTTATGGTCCCTGGAAAAAGAAGAATCTTGCTGACTTTGGAATTATCAATCAGTGCATGTGTCCACAGAGGGTCAATGACCAATATCTGACCAATGTGTTGTTAAAAATCAATGCTAAGCTAGGTGGGATAAATTCATTTTTATCTGTTGAAAAAACTCCTTCTATCCCCATTGTTTCCAAAGCTCCTACTATTATCCTTGGGATGGACGTGTCACATGGTTCACCTGGTCAGACAGATATTCCTTCCATTGCAGCGGTGGTGAGCTCCAGACAGTGGCCTTTGATCTCGAAGTATCGGGCATGTGTTCGAACTCAATCTCCTAAGGTTGAAATGATTGACAATCTGTTCAAGCCTGTAGGTGAAAAGGAAGATGAGGGCATTATCAGGGAACTTTTGGTTGACTTCTATCAAAGTTCTGGGAACAGAAAGCCTGACAATATAATAATATTCAGGGATGGGGTTAGCGAATCGCAGTTCACTCAAGTTTTAAACATTGAGCTTAGTCAAATCATTGAGGCCTGTAAATTCCTTGATGAACAGTGGAACCCCAAATTTGTGGTGATTGTGGCTCAGAAAAACCACCACACCAAATTTTTCCAGAATGGGTCTCCTGATAATGTTCCCCCTGGAACTATTATTGACAACAAAATCTGTCATCCCCGAAATTATGATTTCTACTTGTGTGCACATGCTGGAATGATCGGAACCACTAGGCCCACACATTACCATGTTCTGTTAGATGAGATAGGTTTCTCTGCAGATGATCTACAGGAACTTGTGCATTCTTTGTCATATGTGTATCAGAGGAGCACCACTGCCATATCTGTCGTCGCTCCGGTCTGTTATGCTCACCTGGCAGCAACTCAGCTCGGACAGTTCTTGAAATTTGAGGATAAGTCTGACACTTCGAGCCATGGAGGCCAGTCTTCTGCCTCTGGTGGTGGTGCTGTTCCTCAATTGCCACCGCTGCAGGAAAATGTCTGCAACTCCATGTTCTTCTGTTGA 2826 0.436 MMQCGFFFWKFLVALGLACDEHLFLLMDSFEPNGNGNDDSLPPPPPPPPEVPPNVVPVKAEELPTEPVKKKPSRVPIARRGLGSKGSKLQLLTNHFKVDVNNKDGHFFHYSVALFYEDGRPVEGKGVGRKVIDRVQETYSSELAGKDFAYDGEKSLFTVGALPRNKLEFTVVLEDIISNSRNNGNCSPDGHGSPNEGDRKRMRRPNRAKTFKVEISFAAKIPMQAIANALRGQETENFQEAIRVLDIILRQNAAKKGCLLVRQSFFHNDPMNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPYSLDWGKAKKTLKNLRITTSPSNQEYKICGLSELPCRQQTFTLKGKGGDESAEEITVFDYFSKYRNIELRYSADMPCINVGKPKRPTYLPIELCSLVSLQRYTKALTTLQRASLVEKSRQKPQERMRVLSDVLKVSKYDSDPMLHSCAVRINTGFTQVDGRVLPAPRLKFGNGEEFNPRNGRWNFNNKTFAQPTKIERWAVANFSARCDVKSLVKDLIRCAGNKGIQIDPPFDVFEESPQFRRAPPMVRVDKMFEDIQSKLPGAPQFLLCLLPERKNCDIYGPWKKKNLADFGIINQCMCPQRVNDQYLTNVLLKINAKLGGINSFLSVEKTPSIPIVSKAPTIILGMDVSHGSPGQTDIPSIAAVVSSRQWPLISKYRACVRTQSPKVEMIDNLFKPVGEKEDEGIIRELLVDFYQSSGNRKPDNIIIFRDGVSESQFTQVLNIELSQIIEACKFLDEQWNPKFVVIVAQKNHHTKFFQNGSPDNVPPGTIIDNKICHPRNYDFYLCAHAGMIGTTRPTHYHVLLDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPVCYAHLAATQLGQFLKFEDKSDTSSHGGQSSASGGGAVPQLPPLQENVCNSMFFC 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0568 941 ProSiteProfiles PAZ domain profile. 336 425 IPR003100 GO:0005515
Acco10g0568 941 FunFam Protein argonaute 7 306 429 - -
Acco10g0568 941 SMART Piwi_a_2 594 902 IPR003165 GO:0003676
Acco10g0568 941 MobiDBLite consensus disorder prediction 38 55 - -
Acco10g0568 941 SUPERFAMILY Ribonuclease H-like 578 900 IPR012337 -
Acco10g0568 941 MobiDBLite consensus disorder prediction 35 74 - -
Acco10g0568 941 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 68 904 - -
Acco10g0568 941 CDD Piwi_ago-like 469 896 IPR045246 -
Acco10g0568 941 Gene3D paz domain 305 429 - -
Acco10g0568 941 Pfam N-terminal domain of argonaute 88 249 IPR032474 -
Acco10g0568 941 Pfam Argonaute linker 2 domain 451 497 IPR032472 -
Acco10g0568 941 Pfam Piwi domain 595 902 IPR003165 GO:0003676
Acco10g0568 941 Pfam Mid domain of argonaute 504 585 IPR032473 -
Acco10g0568 941 Gene3D - 661 941 IPR036397 GO:0003676
Acco10g0568 941 SMART DUF1785_2 259 311 IPR014811 -
Acco10g0568 941 SUPERFAMILY PAZ domain 306 465 IPR036085 GO:0005515
Acco10g0568 941 CDD PAZ_argonaute_like 311 424 - -
Acco10g0568 941 Pfam PAZ domain 315 441 IPR003100 GO:0005515
Acco10g0568 941 Pfam Argonaute linker 1 domain 261 309 IPR014811 -
Acco10g0568 941 Gene3D - 489 655 - -
Acco10g0568 941 FunFam Protein argonaute 3 662 941 - -
Acco10g0568 941 ProSiteProfiles Piwi domain profile. 594 902 IPR003165 GO:0003676
Acco10g0568 941 MobiDBLite consensus disorder prediction 182 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0568 Acco-ChrAcco10 15387013 15395812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0568 79 941 Eukaryotic Initiation Factors Gene Family AT5G43810 36.192 5.46e-167 512