Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0543 ATGAACAACTCAATCATCCGGGACATAACTTCAAAACATAGCAAACACTTTCATGTGAATGTTCTGGGCTGCCTGAATATCACATTCAACAAATTCACCATTGAAGCCCCAGCAGAGAGTCCAAATACAGATGGAATCCACATTGGGAGATCAACACAAGTCAAAATACTTCACTCAAACATTGGAACAGGAGATGATTGTATCTCATTAGGTGATGGAAGTCGACAAGTGACAGTCGAGGACGTGACATGCGGACCTGGCCATGGCATTAGTGTTGGAAGCTTGGGAAAGTATGAATATGAAGAACCTGTAGAAGGTTTGATAGTGAAGAACTGCACTTTCAAAAATACTGACAATGGTGTAAGAATCAAGACTTGGCCTAGTACTTCAGTAGAAATCCCAGTCTCTCGACTGCGTTTTGAGAATCTTATCATGATTAATGTCACCAATCCTGTGATCATAGACCAAGAATATTGCCCATGGAACCAATGCTCTAAACAGCTGCTACAACAGACTCCATCAAAGGTAAAAATAAGTAGAGTTTCCTTCAACAACATTAGAGGCACATCAACGACAAAGCAAGGAATGATTCTAATTTGTAGCAGTGGTGTACCTTGTGAGGAAGTTAAACTCTCAAATATTAATCTCAAATTCCAAGGGACTCCTGCAATTGCTACTTCTCCGTTCATCGAGAAAGCTCCCCCTCAACCTGATCATCGGAGGTGGACAGCGACCCCGCCGGAAGAACCAGCTAAAGATAATGCTTCAGCTGCCCGATGTAGCCCTATATCGAAGGGAGACCTCATCCCGTCGGCGACGCAGCCTCATCGGAGTAAGCCTGGTCTAACGGTCACATCGGTGCCCGAGGCAGGTGCTGGCGTAAGCTTGGAGCAGAAAGCTAAAGCGATTCAGAGTGGACCATTGTGGAGTGATGCTTGGAACATAAATGGGCCTCCCTTTATGGACCAACCGAATGGGGTTAAGGTGGATGCTGCAGGAAGCATTTCTCACATTGGGACTCCAAATGGGGTTGAGCTCAATCGAATAGGATCTGCATTTGAGTTCCAAGTGGTGCCACCCGAGAGCCCAACCATTTTAGAGCTAAATTGTTCTAGTCTATCCATGGTGAGTCCCACACTTCCTGGTGGATTTTCTATAAATTCATCATCAATTTCCCAACCATATAGTGTGGATTTTCCTAGTGATGATGAGCATAGATCTAAGGCTATTATTCCTTTCAATGGCTTGTCTCCTATATCTACTGTATCTGTTGGTTTGAGAGGAATCCATATGAAGAGAGCACATGAGGATGATGAATTTCCGGTTGATCGTAATAAATGTAGAAAGCTTGATTTTGGACCTTCTGAGGACAGGACTAATTCCACTCATTGGGGTTCTGTGGTTTTCTGGGTTTGTTCTTCACGCGTGTATGCTTCGTCATTTAATTACACTGGGTTTCAACCACGAGGTGTTACTTGGGAAGGTATGCAGGCAATTTGTTTGATATTCTTCTTTTATGGAGCGATTGTGTTGGGGAATTCAGATATCGATGCACTACTTGAACTCAAGAAGAGCATTCAGAAGGACCCTTCTGGACTAGTTAATTCTTGGGATTCTAGGTCTTTGGCTTCTGACGGATGTCCTCGGAATTGGTATGGGATATTTTGTGACCATGGCAATGTTATATCAATAACTCTGGATAATGCTGGTTTGGTTGGGGAGTTTAATTTCCTTTCCATTAATGGCCTTAAAATGCTTCAAAACTTGTCACTTTCGAACAACCAGTTCACGGGAAGTGTCTCACATTTTGGACCTATGAAGTCACTAGAATTTCTTGATCTTTCAGTCAACAAGTTTCATGGGTCAGTACCCTCTGACCTGCTTGAGTTAAATAACATAGTGTATTTAAATCTTTCATCAAATCAATTCGATGGTACAGTTCCTGTCGGCTTTGACAAACTCAAGCGGTTGAAGTATTTAGATTTGTGCTCTAATAACTTTTCTGGGGATATTATGCATATCTTTTCCCGTATGGGTGGTGTGGTTCATGTTGACCTAAGCACAAACAGGTTTTCTGGTTCACTGGATTTGGGACTTGGAAACAGCTTGTTTCTCTCCTCGATTCAATATTTAAATGTTAGCCGCAATTCCTTGGCTGGTGATCTGTTTGCTCATGATGGGATGCCATATCTTGACAGCTTAGAGGTCTTTGATGCTAATAATAATCAATTAGTGGGTAATATACCTTCGTTCACATTTGTGGTATCTCTAAGGATTCTTCGGCTTGGATGCAACCAATTATCTGGCTCTCTTCCAGAAGGTCTATTGAAGGAGAGTTCAATGGTGTTGTCTGAACTGGATCTTAGTCAAAACAAGCTTGAAGGTCCTGTTGAAAGCATCACTTCTGGAACTCTGAAGAAGCTTAATTTATCTTCAAACAAACTGTCAGGCCCCATACCTTTCAAGGTGGGCCACTGTGCCATAATTGATTTAAGTAACAATATGTTATCGGGTAACTTGTCAAGAATTCAGTATTGGGGTAATTATGTTGAGGTGATTCAGCTTAGTTCAAATTCATTGACCGGAATGCTTCCTAACCAAACCACACAATTCTTGAGGTTGACTGAACTGAAGATATCTAATAACTCATTAGAGGGCAGTCTCCCTTCAGTCTTAGGAACATACCCTGAACTAAAAGAGATTGATCTTAGCCACAACCTACTTTCTGGGTTCCTCCTTCCAAGCTTTTTCACCTCAACTAAATTGACCAAGCTTAACCTCTCACACAACAACATTTCTGGATCAGTATATTTTCAACAAATTCAGAATAACCCGCTAGTTTCTGTTGAAAATTCTGGTCTAGTGTCTATTGATCTCTCATACAACAACTTGAGCGGGCATCTACCTGCAGATATAAGTAAGCTTCACAATTTGGCAAGTCTCAATCTATGTAACAACAAATTCGAAGGTATTATTAATGATCTTCCTGATCAGCTGAGAGAACTCAACTTGTCCTTCAACAATTTTTCTGGAATTGTGCCTGATAAATTAATGAAGTTTCCTGAATCAGCATTTCACCCAGGAAATTCTTTGCTGATCTTTCCTCATTCGCTCACTTCACCAAAAGATGGTGGTGAACTAGGTTTGAAGGAAAAAGGGCCACATATAAAATCTGCAACCAAGATTGCCTTGATTGCAAGTTTGGTTTGTGGTGCTTTTGTTATGGCCCTTCTGAGTGTAATAAGTTTTTATAGGGTTCACTGGCATAAACAAACAACTGTGCATGAAAATAGAATGAAAGATATTGCTCCTCAGAGTTCTTCTCCATCTGGTAGTGAAGTACCTAATAGAAACATAGGAGCAATATCTTCAACCCAAAAGGGGTCTGATGATGTCAGCAATGTTCATACTACTGTAGAGAAGCCAGAAGATATTGATCTTTCTGAATTTGTTAAGAATGAGGAGGGAATATCATCTCCAATGTCTTTTCTATCACTTTCAAATCCTTTATCTTCTAGAAGCTACCACGCATTTGAGAATCCTGGTGCTCTCAAAATATGCTCGCCTGATAACTTGTTCGGAGATTTGAATCTTTTTGATGGGGCCTTGGAGCTCACTGCAGAAGAATTTTCTAGTGCTACAGCGGAAATTATTGGTAGGAGCTGCCATGGAACTCTGTATAAAGCTATACTTGAGTCGGGTCTTGCATTGGCTGTCAAGTCATTAAGGGAAGGAATAGCCAAGAACAAAAAGGATTTTGCAAGGGAAGTAAAGAAACTTGGGACCATCAAGCATCCAAGTCTGATTTCTCTTCAGGGTTACTACTTGGGTCCAAAGGAGACTGATAAGTTCATCATATCCAATTATGTCAATGCACAATCTTTGGACTTTTTTCTCCATGATAGAAGGAATGTTCATCCAATGTCTCTTGATGAAAGGTTGAGGGTGGCTATAGCTGTGGCACAATGTCTGAATTACTTACACAATGAGAAAGCCATACCTCATGGCAATCTCAAATCGACAAACATCCTCCTTGAAATCCCTAACCACAATGTGCTGCTCACTGACTACAGCCTGCATCGGATACTAACCACAGCTGGTACTTCCGAGCAAGTTCAGAATGCAGGTTTACTCGGCTACCGGCCTCCCGAGTTTGCTAGCTCAAGCAAACCATGTCCATCCTTGAAGAGTGATGTGTATGCATTTGGGGTGATCTTGTTAGAGCTTCTAACAGGAAGAAATTCTGGAGACATTGTTACGGGGATCCCCGGGGTCGTTGTCCTCGCTGACTGGGTGCAGTTCTTGGCTGACCAAAATCGAGGCAGCGAGTGCTTGGATAGGCTGCTCTTGGACAAGTATGGTGGTGGGGACCGCCGGCCTCCTCATGTTCTTGATGAAATGTTCAGGGTGGCTCTTAGATGCATCCTACCAGCATCTGAGAGGCCTGACATGCAAACGGTTTTTGAGAATCTTTCAACATTAAGGTAG 4488 0.42 MNNSIIRDITSKHSKHFHVNVLGCLNITFNKFTIEAPAESPNTDGIHIGRSTQVKILHSNIGTGDDCISLGDGSRQVTVEDVTCGPGHGISVGSLGKYEYEEPVEGLIVKNCTFKNTDNGVRIKTWPSTSVEIPVSRLRFENLIMINVTNPVIIDQEYCPWNQCSKQLLQQTPSKVKISRVSFNNIRGTSTTKQGMILICSSGVPCEEVKLSNINLKFQGTPAIATSPFIEKAPPQPDHRRWTATPPEEPAKDNASAARCSPISKGDLIPSATQPHRSKPGLTVTSVPEAGAGVSLEQKAKAIQSGPLWSDAWNINGPPFMDQPNGVKVDAAGSISHIGTPNGVELNRIGSAFEFQVVPPESPTILELNCSSLSMVSPTLPGGFSINSSSISQPYSVDFPSDDEHRSKAIIPFNGLSPISTVSVGLRGIHMKRAHEDDEFPVDRNKCRKLDFGPSEDRTNSTHWGSVVFWVCSSRVYASSFNYTGFQPRGVTWEGMQAICLIFFFYGAIVLGNSDIDALLELKKSIQKDPSGLVNSWDSRSLASDGCPRNWYGIFCDHGNVISITLDNAGLVGEFNFLSINGLKMLQNLSLSNNQFTGSVSHFGPMKSLEFLDLSVNKFHGSVPSDLLELNNIVYLNLSSNQFDGTVPVGFDKLKRLKYLDLCSNNFSGDIMHIFSRMGGVVHVDLSTNRFSGSLDLGLGNSLFLSSIQYLNVSRNSLAGDLFAHDGMPYLDSLEVFDANNNQLVGNIPSFTFVVSLRILRLGCNQLSGSLPEGLLKESSMVLSELDLSQNKLEGPVESITSGTLKKLNLSSNKLSGPIPFKVGHCAIIDLSNNMLSGNLSRIQYWGNYVEVIQLSSNSLTGMLPNQTTQFLRLTELKISNNSLEGSLPSVLGTYPELKEIDLSHNLLSGFLLPSFFTSTKLTKLNLSHNNISGSVYFQQIQNNPLVSVENSGLVSIDLSYNNLSGHLPADISKLHNLASLNLCNNKFEGIINDLPDQLRELNLSFNNFSGIVPDKLMKFPESAFHPGNSLLIFPHSLTSPKDGGELGLKEKGPHIKSATKIALIASLVCGAFVMALLSVISFYRVHWHKQTTVHENRMKDIAPQSSSPSGSEVPNRNIGAISSTQKGSDDVSNVHTTVEKPEDIDLSEFVKNEEGISSPMSFLSLSNPLSSRSYHAFENPGALKICSPDNLFGDLNLFDGALELTAEEFSSATAEIIGRSCHGTLYKAILESGLALAVKSLREGIAKNKKDFAREVKKLGTIKHPSLISLQGYYLGPKETDKFIISNYVNAQSLDFFLHDRRNVHPMSLDERLRVAIAVAQCLNYLHNEKAIPHGNLKSTNILLEIPNHNVLLTDYSLHRILTTAGTSEQVQNAGLLGYRPPEFASSSKPCPSLKSDVYAFGVILLELLTGRNSGDIVTGIPGVVVLADWVQFLADQNRGSECLDRLLLDKYGGGDRRPPHVLDEMFRVALRCILPASERPDMQTVFENLSTLR 1495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0543 1495 ProSiteProfiles Protein kinase domain profile. 1212 1494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0543 1495 SUPERFAMILY Protein kinase-like (PK-like) 1216 1491 IPR011009 -
Acco10g0543 1495 MobiDBLite consensus disorder prediction 227 286 - -
Acco10g0543 1495 ProSitePatterns Polygalacturonase active site. 81 94 IPR000743 GO:0004650|GO:0005975
Acco10g0543 1495 Gene3D Transferase(Phosphotransferase) domain 1 1291 1495 - -
Acco10g0543 1495 SUPERFAMILY L domain-like 514 799 - -
Acco10g0543 1495 Gene3D Phosphorylase Kinase; domain 1 1197 1289 - -
Acco10g0543 1495 Pfam Leucine rich repeat N-terminal domain 513 557 IPR013210 -
Acco10g0543 1495 Pfam Protein tyrosine and serine/threonine kinase 1216 1488 IPR001245 GO:0004672|GO:0006468
Acco10g0543 1495 SUPERFAMILY L domain-like 731 1016 - -
Acco10g0543 1495 SMART LRR_typ_2 606 630 IPR003591 -
Acco10g0543 1495 SMART LRR_typ_2 754 778 IPR003591 -
Acco10g0543 1495 SMART LRR_typ_2 583 605 IPR003591 -
Acco10g0543 1495 SMART LRR_typ_2 975 998 IPR003591 -
Acco10g0543 1495 SMART pbh1 135 156 IPR006626 -
Acco10g0543 1495 SMART pbh1 24 50 IPR006626 -
Acco10g0543 1495 SMART pbh1 104 125 IPR006626 -
Acco10g0543 1495 SMART pbh1 74 94 IPR006626 -
Acco10g0543 1495 SMART pbh1 51 72 IPR006626 -
Acco10g0543 1495 Gene3D - 1 227 IPR012334 -
Acco10g0543 1495 FunFam Nuclear pore complex protein NUP107 512 673 - -
Acco10g0543 1495 Gene3D Ribonuclease Inhibitor 675 850 IPR032675 -
Acco10g0543 1495 MobiDBLite consensus disorder prediction 1097 1134 - -
Acco10g0543 1495 Pfam Leucine rich repeat 873 932 IPR001611 GO:0005515
Acco10g0543 1495 MobiDBLite consensus disorder prediction 1098 1133 - -
Acco10g0543 1495 Gene3D Ribonuclease Inhibitor 851 948 IPR032675 -
Acco10g0543 1495 Pfam Glycosyl hydrolases family 28 2 220 IPR000743 GO:0004650|GO:0005975
Acco10g0543 1495 Gene3D Ribonuclease Inhibitor 949 1026 IPR032675 -
Acco10g0543 1495 Gene3D Ribonuclease Inhibitor 514 674 IPR032675 -
Acco10g0543 1495 SUPERFAMILY Pectin lyase-like 2 221 IPR011050 -
Acco10g0543 1495 FunFam Leucine-rich repeat receptor-like protein kinase 1197 1289 - -
Acco10g0543 1495 PANTHER OS07G0626500 PROTEIN 501 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0543 Acco-ChrAcco10 14910194 14924769 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0543 1 221 Glycoside Hydrolase AT3G07840 57.466 4.34e-82 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco10g0543 PK_Tyr_Ser-Thr 7.1e-28 CL0016