Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0473 ATGGGCTCCAGTGCATTATTGCTTCTGAAACTAGCATTATTGGCGGCCTACTACACACTGACGGCGGTGCCAGCTCCGGCACGGCTGGCGCCTTGCACTGAGAAGTGCGGGAACGTGGATATCTCCTATCCCTTTGGCACGAAGAAAGATGGCTGCGTCAAAGATCCTGATTTTCAAATAAACTGCACACACAACTCTACCAGACGCCACATTCCGTACCTAGCAACAGAAACCGGTCACGACATCGAGGTTCTCAATATCTCTGAGGATACTAGTGAGATTTATGTCTCTATGCCTGTTTTTTATGTTTGCTACGATCCCAAGAAGGGCTCCGAAGCGCATCACTCGTTGGATCGTTTTCAGATGCCTTCCAAGTTTGGCATATCCCATAAAAAGAACAAGTTCTTCGTACTTGGCTGTGAAACCTACGCGTTCCTCTATGACCGTAAAGGAAAAAAACTTAACGGCTGCGACACGAGGTGCAGTGACGACGAGATTTCTTCAGTGAAGAGTAATAATGGAACGTGCAAGAGTGATTTTGAGCTAGCCGTTGCAAATTATACTATTCATATTATTTTTTACGATACCTACTACTATGAGATTAATCCACCAGCGAGGTGCAGCTATGCATTTGTTGCACAGGTCGGATCTTTCAACTATTCCGACAACAACGACCTCAACAAGATAAAAAAAACCAACAGATCTACGGTGGTTCTCGATTGGGCTGTTGATAATACGACTTCATGTGGTGGAGCCTGCAAAAGTAATAATACTGAATGCGTTGAATCAGAAAGTGTCAGCGACCACTACTTCTGCAAATGTAAGACAGGGTTCCATGGCAACCCCTACAGGGACGATGGCTGCAAAGATGTGAATGAGTGCCAGCACACCGACTTAAATAAGTGCTTACATCCGAAGCTTTGCCGAAATACGGATGGAGACTACAAATGTTCTTGTCCAACTGGACATAAAGGCGATGGCCGCCTCATCAATGGAACTGCAGGAGCCTCAGGCTGCAGCCCCACCATCAAAATTCCATTAGCTTTGTTGGGTGTCTTCACACTGGTCTTCACACTGGTCTTCATATTGTGTTGGGCACACAAGAAAAGAACTTTGAAACAACTAAGACAGATAAACTTTGAGCAAAATGGTGGAAACTTGCTTCTACAACAACTTTCGCAACAACAAAGATACACTGACAAAACTAGAATATTTACAGAAGTTGAGCTTAAGAATGCCACAAACAACTTCGATGAAACTAGGATCCTTGGTCGTGGAGGACAAGGCACAGTTTATAAAGGTACATTGCCAGATAATACACTTGTTGCTATTAAGAAGTCTAGAGTTGGAGGGGATCCTCAGCATATTAAAAGTTTTATCAATGAAGTGTTTTTGCTTTCCCAAATTAACCATAGGCATGTGGTCAAACTTTTGGGATGTTGTCTTGAGACTGAAGTGCCCTTGTTAGTTTATGAGTTTGTAGATAACGGCTCACTTCTTGACCACCTAGATCCATCAGAAAATGAATGTTCTATTACATGGGACACTCGGTTAAGAATAGCTACAGAAGTTGCTGGGGCCATTTCATATTTACACTCTTCTGCTTCAATTCCAATTATCCATCGTGATATTAAATCTGCAAACATACTTTTAGACCACAACAACATGGCAAAGGTGTCTGATTTTGGAGCTTCAAGACTTGTGCATCTTGATGAAGCTCAAGTTGCCACTGTAGTTCAGGGAACAATAGGATACCTAGACCCAGAGTACCTTCAGACAGGTCTGTTGAATGAGAAGAGTGACGTTTATAGTTTTGGGATTGTACTCGTGGAGCTTCTTACTGGAAATAAAGCTTTTGAATTCAATACATTGGCTAACTATTTTGTGTCTTCAATGAGAGAAGACCGCTTGTGGGAAATTCTTGATAAACGAGTGCTGGACCAGAAGAATACAATGATTTTGAAGGAAATTGCCTCATTGGCAAAAAGATGCATTAGAGTTAATGGAGAGGAAAGACCTACCATGAAGGAAGTAGCAATGGAGTTAGAAGGTCTGATGGAAATGGGAAAGCATCTTCAAGAGAAGGACAACGATATGATGGTAAAAAAAAGTGAATACTTATTGGGATATTGTCCAAATGATGATGGATATGGGAGTACCAGTGCTAGTTTTTCAGTTACTAGTGGCCCTGATAGCGTACAAAAGCATGTAACATTTGATATTATAGATGGGGGCAGATGA 2241 0.4212 MGSSALLLLKLALLAAYYTLTAVPAPARLAPCTEKCGNVDISYPFGTKKDGCVKDPDFQINCTHNSTRRHIPYLATETGHDIEVLNISEDTSEIYVSMPVFYVCYDPKKGSEAHHSLDRFQMPSKFGISHKKNKFFVLGCETYAFLYDRKGKKLNGCDTRCSDDEISSVKSNNGTCKSDFELAVANYTIHIIFYDTYYYEINPPARCSYAFVAQVGSFNYSDNNDLNKIKKTNRSTVVLDWAVDNTTSCGGACKSNNTECVESESVSDHYFCKCKTGFHGNPYRDDGCKDVNECQHTDLNKCLHPKLCRNTDGDYKCSCPTGHKGDGRLINGTAGASGCSPTIKIPLALLGVFTLVFTLVFILCWAHKKRTLKQLRQINFEQNGGNLLLQQLSQQQRYTDKTRIFTEVELKNATNNFDETRILGRGGQGTVYKGTLPDNTLVAIKKSRVGGDPQHIKSFINEVFLLSQINHRHVVKLLGCCLETEVPLLVYEFVDNGSLLDHLDPSENECSITWDTRLRIATEVAGAISYLHSSASIPIIHRDIKSANILLDHNNMAKVSDFGASRLVHLDEAQVATVVQGTIGYLDPEYLQTGLLNEKSDVYSFGIVLVELLTGNKAFEFNTLANYFVSSMREDRLWEILDKRVLDQKNTMILKEIASLAKRCIRVNGEERPTMKEVAMELEGLMEMGKHLQEKDNDMMVKKSEYLLGYCPNDDGYGSTSASFSVTSGPDSVQKHVTFDIIDGGR 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0473 746 ProSiteProfiles Protein kinase domain profile. 417 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0473 746 SUPERFAMILY EGF/Laminin 290 327 - -
Acco10g0473 746 Pfam Wall-associated receptor kinase galacturonan-binding 32 96 IPR025287 GO:0030247
Acco10g0473 746 ProSitePatterns Calcium-binding EGF-like domain signature. 290 317 IPR018097 GO:0005509
Acco10g0473 746 ProSiteProfiles EGF-like domain profile. 290 329 IPR000742 -
Acco10g0473 746 SMART serkin_6 417 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0473 746 CDD STKc_IRAK 423 685 - -
Acco10g0473 746 SMART egfca_6 290 340 IPR001881 GO:0005509
Acco10g0473 746 SUPERFAMILY Protein kinase-like (PK-like) 395 682 IPR011009 -
Acco10g0473 746 Gene3D Transferase(Phosphotransferase) domain 1 494 708 - -
Acco10g0473 746 Pfam Calcium-binding EGF domain 290 324 IPR001881 GO:0005509
Acco10g0473 746 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 28 688 IPR045274 GO:0007166
Acco10g0473 746 FunFam Fibrillin 2 285 330 - -
Acco10g0473 746 SMART egf_5 293 340 IPR000742 -
Acco10g0473 746 SMART egf_5 248 289 IPR000742 -
Acco10g0473 746 FunFam Wall-associated receptor kinase 2 494 705 - -
Acco10g0473 746 FunFam Wall-associated receptor kinase 2 387 493 - -
Acco10g0473 746 CDD EGF_CA 290 326 - -
Acco10g0473 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Acco10g0473 746 Gene3D Phosphorylase Kinase; domain 1 389 493 - -
Acco10g0473 746 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 308 319 IPR000152 -
Acco10g0473 746 Pfam Protein kinase domain 418 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0473 746 Gene3D Laminin 243 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0473 Acco-ChrAcco10 13400438 13406875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0473 1 744 Receptor kinase-like Gene Family AT1G21230 42.338 1.58e-175 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Acco10g0473 Pkinase 2.4e-50 CL0016