Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0404 ATGGTTCCCAGATTTGGGTTTCCACTCCTCTTCTTCTTGTTATTTTTTCCCCTTTTTTTCAACGCAGAACCAAAGTGTGAGAAACGATGCGACTTGGCTTTAGCCTCCTACTATATTTCAGACCAAATCGGCGATCTCACGAATCTTTCGAAGATCATGCAATCACCGGTTCTTCAAAAACCTGAAGATATCCTCAGCTATAACAAAGACACAATTCCTAATAAAGACTATATCCCAAGGAACACTCGAGTCAACGTTCCGTTCCCTTGCGATTGCATCGATGAGGGGGCAAATCTAGGTTACGTATTTAAGTACTCGATTCAGAAAGAGAACACCTATACGAAGATTGCGAATCAGATCTATTCCAATTTGACAACTGATACGTCGTTGCAGAACCGGAATGGCTATTCGCCGAACAATATTCCCGATTATGTAACGCTCGATGTTGCCGTGAACTGTAGGTGTGGGGATAGCCACATTTCGAAAAAGTATGGCTTGTTCATCACATACCCACTTAGAGCTGAGGATTCTCTGGATTCAGTTGCGAACCAGACGAAGGTTGATCCAGAGTTGCTGAGAAGGTACAATCCTGGTGCTGATTTCAACAAAGGGAGTGGTTTGGTGTACATACCCGGAAAAGGCCAGAATGGTGTTGAAGTGCCAATGCCCCCGAGCACAAAAGGTCTAAAAGGTGGGGCTATTGCTGGAATAGCTGCTGGTGCAGCAGTTGGTGTTCTCTTCTCTGCTTGTATGTGTGTTGTATATTACCAAAAGAAGAAGGAGGAAGAGGTAAAGCTGCTTTCAGGCGAATCAGCAGTCTACTCTTCTCAACATGGGAAAGGTTCCAATGGTCCTCCTGCTTCTGCTAATACCAGCAACACTACCATTTCTGTGGACAAATCGGTGGAGTTCTCATATGAAGAACTAGCTCAAGCCACAAATAACTTCAGTACTGCAAATAAAATTGGTCAAGGTGGTTTTGGGGCAGTCTACTATGCAGAGTTGAGAGGGGAGAAAGCTGCAATAAAAATGATGGAGTCGCAAAAATCAAAAGAGTTTCTTGCTGAATTGAAAGTGTTAACACGTGTTCATCACCTAAACTTGGTACGCTTGATTGGATATTGTGTTAAGAAGGATTCTCTTTTCCTTGTATATGAATACATTGACAATGGAGACTTAAGCCAACACCTGCGAGATTCAGGGAGAGAAACCTTGCCATGGTCTACCCGGTTGCAAATTGCTCTGGATTCAGCTAGAGGTCTTGAATACATTCATGAGCATACATGGCCTGTATATATTCATCGTGACATAAAGTCAGCTAATATATTGATAGATCGAAACTTCTGTGCAAAGGTTGCAGATTTTGGTTTGACCAAGCTGACTGAAGTTGGAAGTTCATCAATTCCCACTGCTAATATTGCAGGCACATTTGGTTATATGCCACCTGAATATGCATATGGTAGTGTTTCACCAAAAATCGACGTCTATGCATTTGGAGTTGTTCTTTATGAACTTATATCTGCTAAAGAAGCTGTGTTGCGGGTTGGTGAAGTTGGTTCTGTAACAACAATAGGTCTTGTCTCTTTGTTTGATGAAGCTCTTGAGCAGCCTAATCCTAAAGAACATCTTCAAAAGCTTGTTGATCCTATGCTCGGCGACCAATACCCAATTGACGTAGTCTACAAGATGGCACAAATAGCCAAAATGTGCACAGAGACAACCCCAGAGAGACGTCCAAGTATGAGATCTATTGTTGTGTCTCTCATGACACTTTCGTCTACTTCTTTGGAATGGGATATTGCCTCCTTGCAAGAAAATCCAACACTCGCAAATATGATGTCTGGAAAGTAG 1851 0.4241 MVPRFGFPLLFFLLFFPLFFNAEPKCEKRCDLALASYYISDQIGDLTNLSKIMQSPVLQKPEDILSYNKDTIPNKDYIPRNTRVNVPFPCDCIDEGANLGYVFKYSIQKENTYTKIANQIYSNLTTDTSLQNRNGYSPNNIPDYVTLDVAVNCRCGDSHISKKYGLFITYPLRAEDSLDSVANQTKVDPELLRRYNPGADFNKGSGLVYIPGKGQNGVEVPMPPSTKGLKGGAIAGIAAGAAVGVLFSACMCVVYYQKKKEEEVKLLSGESAVYSSQHGKGSNGPPASANTSNTTISVDKSVEFSYEELAQATNNFSTANKIGQGGFGAVYYAELRGEKAAIKMMESQKSKEFLAELKVLTRVHHLNLVRLIGYCVKKDSLFLVYEYIDNGDLSQHLRDSGRETLPWSTRLQIALDSARGLEYIHEHTWPVYIHRDIKSANILIDRNFCAKVADFGLTKLTEVGSSSIPTANIAGTFGYMPPEYAYGSVSPKIDVYAFGVVLYELISAKEAVLRVGEVGSVTTIGLVSLFDEALEQPNPKEHLQKLVDPMLGDQYPIDVVYKMAQIAKMCTETTPERRPSMRSIVVSLMTLSSTSLEWDIASLQENPTLANMMSGK 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0404 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Acco10g0404 616 FunFam LysM receptor kinase 2 295 387 - -
Acco10g0404 616 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 11 603 IPR044812 GO:0019199|GO:0045087
Acco10g0404 616 SUPERFAMILY Protein kinase-like (PK-like) 290 588 IPR011009 -
Acco10g0404 616 ProSiteProfiles Protein kinase domain profile. 316 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0404 616 Gene3D Transferase(Phosphotransferase) domain 1 388 605 - -
Acco10g0404 616 Pfam Protein tyrosine and serine/threonine kinase 318 587 IPR001245 GO:0004672|GO:0006468
Acco10g0404 616 Gene3D Phosphorylase Kinase; domain 1 287 387 - -
Acco10g0404 616 FunFam PTI1-like tyrosine-protein kinase 3 388 602 - -
Acco10g0404 616 SMART serkin_6 316 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0404 616 ProSitePatterns Protein kinases ATP-binding region signature. 322 343 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0404 Acco-ChrAcco10 11247368 11262907 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0404 13 616 Receptor kinase-like Gene Family AT3G21630 55.161 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Acco10g0404 PK_Tyr_Ser-Thr 5.8e-48 CL0016