Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0403 ATGAATGCTGATGACATAGTGGAATCACAGGCTTTGAATTTTCTCATCCAAATCTCAAATGGCATTTCAATAACCAGATATGGATTTCTGGCTTTCTTCTTCTTCGCTTCAGTTTTTCCTAGTGCAGAGTCCAGTTGCAGCAAGAGCTGTGATTTAGCTCTAGCTTCTTACTACGTTTGGCCAGGTTCTAATCTCTCATACATCACACAACAAATGCGATCTCCGATTATGACAGACGAAACCGTCATCGTCAGCTACAACAAAGATCAAACAATCACCAGCAATTATGTTCAATCCACTACAAGAATTAACATCCCTTTCCCATGTGATTGTCTTCAAGATGGATCTCTGGGTCATCTGTTTCAGTACACGATTAACCAAGGGGATACCTACAAGACTGTTGCTGAGAGGTACTATTCCAATTTGACCACTGTTGAGTCGTTGAGGAAGTTCAATGGCGACACAATTCCTGCAAGTGGAACACTCAGTGTTGCTGTTAGTTGTTATTGTGGTAACAGCCAAGTATCAAAGCTCTATGGACTGTTCATCACGTGGCCACTTAGGCCTGAGGATACTTTGCAATCAATTGCCAGTAATGAGAAGCTTGACGCTGGGCTGCTGCAGAAGTATAATCCGGGTGTGAATTTCAGCCAAGGGAGTGGTTTGGTTTATATACCAGGCAAAGATCAAAATGGCATCTACCCTCCAATGGAGTCTAGTTCCAGAGCAGGTCTGTCTGGCGGTGTTATTGCTGGAATATCTATTGGAGTAGTTGCTGCATTTCTGCTGTTGGCAGTTTCTATATATTTTGGATATTTCCGAAGGAAGATGGATGACACAAAACCACTCTCTCAAGATTTCCAAGAGTTTTCTGTTCAAGAAGAGAAGGGATATGTTGGTCCTACTGGCATCACAGTGGACAAGTCAGTGGAGTTCTCATATGAAGAACTAGCTGCAGCCACAAATGATTTCTCTGGGGCTAATAAAATTGGTCAAGGAGGCTTTGGTGCTGTCTATTATGCAGAGCTGAGAGGCGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCAACTAGAGAATTTCTTGCTGAATTAAAAGTCCTAACAAATGTTCATCACCTTAATCTGGTGCGCTTAATTGGGTATTGCACTGAGAACTCTCTCTTCCTGGTTTATGAATTCATTGATAATGGAAACTTGAGTGAACATCTGCGTGGTACAGGAAGAGATCCGTTACCATGGCCTACCCGAGTTCAAATTGCTCTGGATTCTGCCAGAGGTCTTGAATATATTCATGAGCATACAGTTCCTGTGTATATCCACCGCGACATAAAATCGGCAAATATATTGATAGATAAGAGCTTACATGGGAAGGTTGCAGATTTTGGATTAACTAAGTTGACAGAAGTGGGAAACTCGTCACTTCCCACTGGTCATCTTGTGGGAACATTTGGATATATGCCACCTGAATATGCTCAGTATGGTGATGTCTCTCCTAAGGTAGACGTCTACGCTTTTGGAGTTGTTCTTTTTGAACTTATTTCTGCCAAGGAAGCAATTGTCAAGACAACTCAATCAGATGCTGGCTCAAAGGGCCTTGTAACAATGTTTCATGGAGTTCTTAATCAGCCTGATCCGACGGAAGATCTACGCAAATTGGTTGACCCAAGGCTTGGGGATGACTACCCTATTGACTCAGCTTTGAAAATGGCTCAACTTGCAAAAGCATGCACGCAAGAGAATCCCCAACTACGGCCAACTATGAGATCCATTGTAGTTGCTCTCATGACACTTCATTCTTCCATCAATGACTGGGATGTTGGTGCCTTCTACAATAACGAGAATCTTATAAATCTGATGTCAGGAAGATAA 1872 0.4236 MNADDIVESQALNFLIQISNGISITRYGFLAFFFFASVFPSAESSCSKSCDLALASYYVWPGSNLSYITQQMRSPIMTDETVIVSYNKDQTITSNYVQSTTRINIPFPCDCLQDGSLGHLFQYTINQGDTYKTVAERYYSNLTTVESLRKFNGDTIPASGTLSVAVSCYCGNSQVSKLYGLFITWPLRPEDTLQSIASNEKLDAGLLQKYNPGVNFSQGSGLVYIPGKDQNGIYPPMESSSRAGLSGGVIAGISIGVVAAFLLLAVSIYFGYFRRKMDDTKPLSQDFQEFSVQEEKGYVGPTGITVDKSVEFSYEELAAATNDFSGANKIGQGGFGAVYYAELRGEKAAIKKMDMQATREFLAELKVLTNVHHLNLVRLIGYCTENSLFLVYEFIDNGNLSEHLRGTGRDPLPWPTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKSLHGKVADFGLTKLTEVGNSSLPTGHLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLFELISAKEAIVKTTQSDAGSKGLVTMFHGVLNQPDPTEDLRKLVDPRLGDDYPIDSALKMAQLAKACTQENPQLRPTMRSIVVALMTLHSSINDWDVGAFYNNENLINLMSGR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0403 623 CDD STKc_IRAK 330 592 - -
Acco10g0403 623 Pfam LysM domain 123 158 IPR018392 -
Acco10g0403 623 Gene3D Transferase(Phosphotransferase) domain 1 395 611 - -
Acco10g0403 623 ProSiteProfiles Protein kinase domain profile. 324 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0403 623 SUPERFAMILY Protein kinase-like (PK-like) 306 595 IPR011009 -
Acco10g0403 623 FunFam LysM receptor kinase 2 303 394 - -
Acco10g0403 623 Pfam Protein tyrosine and serine/threonine kinase 328 594 IPR001245 GO:0004672|GO:0006468
Acco10g0403 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Acco10g0403 623 FunFam PTI1-like tyrosine-protein kinase 3 395 609 - -
Acco10g0403 623 CDD LysM 123 157 IPR018392 -
Acco10g0403 623 Gene3D Phosphorylase Kinase; domain 1 304 394 - -
Acco10g0403 623 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 30 608 IPR044812 GO:0019199|GO:0045087
Acco10g0403 623 SMART serkin_6 324 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0403 623 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0403 Acco-ChrAcco10 11231473 11237515 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0403 22 623 Receptor kinase-like Gene Family AT3G21630 57.395 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Acco10g0403 PK_Tyr_Ser-Thr 2.6e-45 CL0016