LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco10g0401	ATGGAACCCAGATATGGATTTCTGGCTTTCTTCTTCATCTTGTTCTTCGCTTCAGTTTTTCCCTGTGCAGAATCCAGTTGCAGCAAGGGCTGTGATTTAGCTCTAGCTTCTTACTACGTCCGGTCAGGTTCCAGTCTCTCATTCATCGCAGAACAAATGCGATCAGAGATTGTAACAGACGAAAGCGCCATCGTTAGCTACAACAAAGACCAAACACCCAACCAATTTTATGTCCAATCCACAAAAAGAATCAACATCCCTTTCCCATGCGATTGTCTTGAAGGCGAATTTCTGGGTCATGTGTTTCAGCACGAGATTGACCATGGGGATACATATGAGACTGTCGCTGAGTCGTATTATTCCAATTTGGTCACTGTTGAGTCCTTGAGGAAGTTCAATGGCGACACAATACCTGAAAGAGGAAAACTTAATGTTACTGTTAATTGTTCTTGCGGTGATAGCCAAGTATCGAAGCTCTATGGATTGTTCATCACATGGCCACTTAGGTCTGAGGATACTTTGGAATCAATTGCCTATAGTGAGAATCTTGACGCTGGGTTGCTCCAGAAATATAATCCAGGTGTGAATTTCAGCCAAGGAAGTGGATTGGTTTATATACCAAGCAAAGGTCTGTCTGGTGGGGTTATTGCTGGAATATCTGTTGGAGTGGTAGCTGGAATTTTGCTGTTGGCAATTTCTATATATTTTGGATTTTTCCGAAAGAAGATAGATGACACGAAATCATTCTCTCAAGATTTCCAAAAGTTCTCTGTTCAAGAAGAGAAGGATGCAGCCTCTGCTAATGTTGAATCTCAAACTTCAGGATATGGTGGTCCTACTGGCATCACAGTGAACAAATCAGTGGTGTTCTCGTATGAAGAACTAGCTGCTGCCACAAGTAACTTCAGTATGGCTAATAAAATTGGTCAAGGAGGCTTTGGTGCTGTCTATTATGCAGAGCTGAGAGGCGAGAAAGCCGCAATCAAAAAGATGGATATGCAAGCTACAAGAGAATTTATAGCTGAATTAAAAGTCCTAACAAATGTTCATCACCTTAACCTGGTGCACTTAATTGGATATTGTACTGAGAGCTCTCTTTTCCTGGTTTATGAATTCATTGATAATGGAAACTTGAGTCAACATCTGCGTGGTACAGGAAGAGACCCATTACCTTGGACTACCCGAGTTCAAATTGCTTTGGATTCTGCCAGAGGTCTTGAATATATTCATGAGCATACAGTTCCTGTGTATATTCACCGCGACATAAAGTCGGCAAATATACTGATAGATAAGAGCTTCCATGGGAAGGTTGCAGATTTTGGATTAGCTAAACTGACTGAAGTGGGAAACTCATCACTTCCAACTGGTCATCTTGTGGGAACATTTGGATATATGCCACCAGAATATGCTCAGTATGGTGATGTCTCTCCTAAGGTAGATGCCTACGCTTTTGGAGTTGTTATTTTCGAACTTATTTCTGCCAAGGAAGCAATTGTCAAGACAACTCAATCCGATGCTGACTCAAAGGGCCTTGTAACAATGTTTCATGAAGTTCTTAATCAGCCTGATCCTTCGGAAGATCTTCGCAAATTGGTTGACCCAAGGCTGGGGGATGACTACCCTATTGACTCAGTTTTAAAAGTGGCTCAACTCGCAAAAGCATGCACACAAGAGAATCCCCAACTGCGTCCAACTATGAGATCTATTGTAGTTTCTCTCATGTTAATTGGGATGAGATCATGTAGCAATTCTGAGGCATTATTGAAGCACAAGATATCTGTAAATGGTGTTCTGGTACTGATCTTGCAGTGGGGCCCAATGGAGATGCTTGGCAGAGGCATTAGGTCTAAGAAGAGCTATGAGCCCATGACAAAGGATTGA	1881	0.42	MEPRYGFLAFFFILFFASVFPCAESSCSKGCDLALASYYVRSGSSLSFIAEQMRSEIVTDESAIVSYNKDQTPNQFYVQSTKRINIPFPCDCLEGEFLGHVFQHEIDHGDTYETVAESYYSNLVTVESLRKFNGDTIPERGKLNVTVNCSCGDSQVSKLYGLFITWPLRSEDTLESIAYSENLDAGLLQKYNPGVNFSQGSGLVYIPSKGLSGGVIAGISVGVVAGILLLAISIYFGFFRKKIDDTKSFSQDFQKFSVQEEKDAASANVESQTSGYGGPTGITVNKSVVFSYEELAAATSNFSMANKIGQGGFGAVYYAELRGEKAAIKKMDMQATREFIAELKVLTNVHHLNLVHLIGYCTESSLFLVYEFIDNGNLSQHLRGTGRDPLPWTTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKSFHGKVADFGLAKLTEVGNSSLPTGHLVGTFGYMPPEYAQYGDVSPKVDAYAFGVVIFELISAKEAIVKTTQSDADSKGLVTMFHEVLNQPDPSEDLRKLVDPRLGDDYPIDSVLKVAQLAKACTQENPQLRPTMRSIVVSLMLIGMRSCSNSEALLKHKISVNGVLVLILQWGPMEMLGRGIRSKKSYEPMTKD	626

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco10g0401	626	PANTHER	CHITIN ELICITOR RECEPTOR KINASE 1-RELATED	11	582	IPR044812	GO:0019199\|GO:0045087
	Acco10g0401	626	FunFam	PTI1-like tyrosine-protein kinase 3	373	586	-	-
	Acco10g0401	626	SMART	serkin_6	302	575	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco10g0401	626	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	417	429	IPR008271	GO:0004672\|GO:0006468
	Acco10g0401	626	Gene3D	Transferase(Phosphotransferase) domain 1	373	592	-	-
	Acco10g0401	626	SUPERFAMILY	Protein kinase-like (PK-like)	284	575	IPR011009	-
	Acco10g0401	626	Pfam	Protein kinase domain	304	570	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco10g0401	626	Gene3D	Phosphorylase Kinase; domain 1	282	372	-	-
	Acco10g0401	626	FunFam	LysM receptor kinase 2	281	372	-	-
	Acco10g0401	626	ProSiteProfiles	Protein kinase domain profile.	302	575	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco10g0401	626	ProSitePatterns	Protein kinases ATP-binding region signature.	308	330	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco10g0401	Acco-ChrAcco10	11188240	11194180	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco10g0401	13	573	Receptor kinase-like Gene Family	AT3G21630	55.688	0.0	631

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LysM	Acco10g0401		Pkinase	3.2e-44	CL0016