Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0400 ATGCAACCCAAAAGCGATAATGCCGTAGTATTAGCAGTGTTTTTCCTAATTCTATTGTTAGAAACAACTTTTCTCATCAACAACGTAGAATCCAAGTGTCTTAAAGGATGTCCTTTAGCTTTAGCATCCTACTACGCTCAAAATACCACTCTAGGTGATATAACTCAGCTTCTGAGATCAGATCTTGTGTTAGATTCCGAAGTTATTTCCAAATACAACGAAGGATCAATAGTATCCAACAATAATGGAATATACATTCAATCCTTCACAAGAATCAACATCCCTTTCCCTTGTGATTGCATCAATAATGGGGATTTTCTGGGTCATGTGTTCGAGTACACAATATCAGAAGGAGACACATATGATTCCATTGCTACAAAAACATATTCTTCGTTGACCACAGCGGATTCACTGAGAAGATTCAATAACTATAGTGATCCAAATCAGCTTCCTCTCAATGAAGGGCTTAATGTCACGGTGAATTGTTCATGTGGGAACAGACAGATTTCCAAGGATTATGGTTTGTTTATTACTTATCCACTTGGGTTTGAAGATAGCTTGGAATCCATTGTGAACCAGACTGGTATTGATGCAACGTTGCTTCAGAGTTATAATCCTGGTGTGAATTTCAGCCAGCAGGGTGGAGTGCTTTTTATTCCAGGAAGAGATCAGAATGGAAATTACCTGCCCCTGGACCCTAGGTCAAGAGGTCTAAGTGCGGTTGCTATTGCTGGCATATGTGTTGGAGCGACATTCTTTGTGTTTCTATCGTTAGCAGCTTATGTATTTGTAAGACTTTTCCGAAGAAAAAAGACCGCCAAAGTGGCATTGTTCACAGAAAATTCTACGGAGCTTCCGAATCAAGACGGTATCTTTCGATTGTGCTCGGCCACTTTACTCTGTGAACCATCTTCAAAGCTTTTTCGTCTCTTCGATGATGGGGATGACCAGGAGTCATCGGCTCCACGCTTCAAGTTTACAACCGCAACTCTTTCAATCAGGACCCCAACATCACGCCTTATATCAGCCGAATTAATGGAACAAGTTGAGTATTCTTCAGCATGCTCCACCAAAAAGGTCTTTCTGTCAACATCATTTTTAACTTTCAAAGTTTGGTTCGGGCCCAAACTATTCAGAGCTAGTGGCGCTGCTAGTACTGCTGATCTTAGAGGCATCATGGTTGGAAAATCAAAGGAGTTTTCGTATCAAGAAATAGCCAAAGCTACCAATAACTTCAGCTCCGATAACAAGATTGGTCAAGGAGGTTTTGGAGTAGTATATTATGCCGAGCTAAGAGGCGAGAAAACTGCAATCAAGAAGATGGATATAAAAGCATCACAAGGATTTCTTGCTGAGTTGAAGGTTTTAACACATGTTCATCATTTGAATCTGGTGCGGTTGATTGGATATTGTGTGGAGGGATCGCTTTTCCTTGTTTATGAATACGTTAACAATGGAAACTTAAGCCATCATTTGGTTTCCTCAGGGCTAGATCCATTGCCATGGGCGACAAGGGTGGCAGATTTTGGATTAAGCAAACTCATTGAAGTTGGAAATGCCTCGCTTAACACACGTCGTCTTGTGGGAACATTTGGATATATGTCTCCAGAGTATGCTCAATATGGAATAACATCTCCAAAAATTGATGTATATGCTTTTGGAGTGGTACTTTATGAACTCATATCTGCTAAGAATGCTGTCCTCAAGACTACCACTGGTGAATTTGTTGCTGAATCAAAAGGCCTTGTAGCTCTGTTTGAGAAATGTCTTCGTAGGCCAGATGCTGTTGAAGATCTTCGCAACCTTGTGGATCCTAGACTTGGACATAACTACCCCATTGATTCAGTTTATAAGATGGCCCAACTTGGTAGAGCTTGTACACAAGATGATCCACAGCTACGTCCCGCAATGAGATCTGTTGTTGTAGCTCTTATGACACTTTCATCATCTTCTTCATATGTAAATTGTGACGTTGTTGGTTCTGCCTTCTCTCATCATCAAACTATCATAAATCCACTCTCTGGAAGATAA 2031 0.4067 MQPKSDNAVVLAVFFLILLLETTFLINNVESKCLKGCPLALASYYAQNTTLGDITQLLRSDLVLDSEVISKYNEGSIVSNNNGIYIQSFTRINIPFPCDCINNGDFLGHVFEYTISEGDTYDSIATKTYSSLTTADSLRRFNNYSDPNQLPLNEGLNVTVNCSCGNRQISKDYGLFITYPLGFEDSLESIVNQTGIDATLLQSYNPGVNFSQQGGVLFIPGRDQNGNYLPLDPRSRGLSAVAIAGICVGATFFVFLSLAAYVFVRLFRRKKTAKVALFTENSTELPNQDGIFRLCSATLLCEPSSKLFRLFDDGDDQESSAPRFKFTTATLSIRTPTSRLISAELMEQVEYSSACSTKKVFLSTSFLTFKVWFGPKLFRASGAASTADLRGIMVGKSKEFSYQEIAKATNNFSSDNKIGQGGFGVVYYAELRGEKTAIKKMDIKASQGFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYVNNGNLSHHLVSSGLDPLPWATRVADFGLSKLIEVGNASLNTRRLVGTFGYMSPEYAQYGITSPKIDVYAFGVVLYELISAKNAVLKTTTGEFVAESKGLVALFEKCLRRPDAVEDLRNLVDPRLGHNYPIDSVYKMAQLGRACTQDDPQLRPAMRSVVVALMTLSSSSSYVNCDVVGSAFSHHQTIINPLSGR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0400 676 FunFam PTI1-like tyrosine-protein kinase 3 503 657 - -
Acco10g0400 676 ProSiteProfiles Protein kinase domain profile. 412 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0400 676 Gene3D Phosphorylase Kinase; domain 1 384 482 - -
Acco10g0400 676 SMART LysM_2 178 220 IPR018392 -
Acco10g0400 676 SMART LysM_2 112 159 IPR018392 -
Acco10g0400 676 ProSiteProfiles LysM domain profile. 111 158 IPR018392 -
Acco10g0400 676 Gene3D LysM domain 111 168 IPR036779 -
Acco10g0400 676 FunFam LysM receptor kinase 2 391 482 - -
Acco10g0400 676 Pfam LysM domain 113 150 IPR018392 -
Acco10g0400 676 Pfam Protein tyrosine and serine/threonine kinase 415 495 IPR001245 GO:0004672|GO:0006468
Acco10g0400 676 Gene3D Transferase(Phosphotransferase) domain 1 483 660 - -
Acco10g0400 676 SUPERFAMILY Protein kinase-like (PK-like) 392 647 IPR011009 -
Acco10g0400 676 CDD LysM 113 158 IPR018392 -
Acco10g0400 676 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 19 506 IPR044812 GO:0019199|GO:0045087
Acco10g0400 676 ProSitePatterns Protein kinases ATP-binding region signature. 418 440 IPR017441 GO:0005524
Acco10g0400 676 Pfam Protein kinase domain 505 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0400 Acco-ChrAcco10 11171018 11183722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0400 382 676 Receptor kinase-like Gene Family AT3G21630 55.060 2.89e-107 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Acco10g0400 Pkinase 9e-12 CL0016