Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0390 ATGCTTGATGCAGAGATTGCTTTTACAATGCAAGCAAATGAGAAATGTGATGTTTATAGTTTTGGTGTTCTCACATTAGAAATTTTAATGGGAAGACATCCGGGAGAGTTCATTTATTCTTTGACTGAGATTCAAACATCCTATGATTTGTCATTAAAGGATGTGTTGGATAAGCGACTTCCTCGACCCTCAAACCAAGTTGTTAAGGAAGTAATGTTGATTGCAAAAATTGCACTTGCATGCTTGAATGAAAATCCTCGATGCCGGCCGACCATGGAACAAGTATCTCTGAAACTTTCAGTGCCTAAACCTTATTCAGTGAATCAATTTGACAGCATCACACTTGGACAACTCATGAAAGCTTAA 366 0.377 MLDAEIAFTMQANEKCDVYSFGVLTLEILMGRHPGEFIYSLTEIQTSYDLSLKDVLDKRLPRPSNQVVKEVMLIAKIALACLNENPRCRPTMEQVSLKLSVPKPYSVNQFDSITLGQLMKA 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0390 121 PANTHER LEUCINE RICH REPEAT KINASE 2 4 103 - -
Acco10g0390 121 SUPERFAMILY Protein kinase-like (PK-like) 5 100 IPR011009 -
Acco10g0390 121 Gene3D Transferase(Phosphotransferase) domain 1 1 101 - -
Acco10g0390 121 Pfam Protein tyrosine and serine/threonine kinase 5 98 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0390 Acco-ChrAcco10 10947903 10948268 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0390 5 95 Receptor kinase-like Gene Family AT5G65700 41.053 1.93e-12 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco10g0390 PK_Tyr_Ser-Thr 3.8e-08 CL0016