Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0388 ATGAATAACTCGACAATCGCACCATGGAAATATCATGTTTTCCTGAGCTTCAGAGGAGAAGACACCCGAAAAGGCATCACAGACCACTTACACGCTGCTCTTGAACAAAGAGGTATCATAACTTTCTTAGATGATAAGCTCAACAGAGGAGAGGTTATTTCTAATCAACTTCTGCGAGCAATTGATGAATCTCTTATCTCTCTTGTTATTCTCTCTGAAAGTTTTGCTTCTTCTAGTTGGTGTTTGGATGAACTTCAAAGGATTCTTGAATCTAAGAAAAATTTGGGTAGAGAAGTTATCCCAATCTTTTATAATATTGATCCATCTGATGTGCGTCAACAAAGAGGTAGCTTTGCTCGTGCCCTTCAAAAACATGGTGAGAGTTTTGCTAACAACAAAGAGAAGGTGCAAAGATGGAAAGATGCCTTACATGAAGTTGCAAACATATCTGGCTATGACTCCACAGATCAGCATGAAGCAAAACTCATTGAAGAAATTACAGGAAAAGTATGGGCAAAGATACAACCTAAATTACCATATTTTTTCTACAATGAGCTTGTTGGCATGGAATCAAGATTAGAAGAAATGAATTCACTTTTAAATATTGGATTATCTGATGTTCGCTTAATAGCAATATGGGGCATGACTGTGCATGGAGAATTTGAAATCTACAAGGCTAAATTGTTAAACAACTATGAATCTCTCCAACTCTTCTGTAAGAAGGCTTTCAAAATGGATAAACCTATAGATAGTTATTCGAAGTTGTGTAAAGACATCATCCACCAAGCTGATGGCCTACCATTAACTCTTGAAGTGTTGGGTTGTTATTTCTGTGGAAAAAGTGAACTTGAATGGAAAGAAGCTTTTGAAAAAATCAAGAAGTCTCCACCGAGCAATATTCTAAAGAGACTTAGAATAAGTTATGATGCATTAAGTGATTCAGAAAAGAAAATATTTTTAGATGTTGCTTGTTGTTTTAAGGGAATGATCAAAGGTCAAGTGACACAAATATTTGAAATATGTGGTGATCTTTATCCAACACTTGGAATAAGAGAACTTGTTGAGAAATGCTTGTTAACAGAATTTCATAGTAATAATGGTGCATGTCATTTGGGTATGCATGATATCCTCCAAAAGATGGGCAGAAGCATTGTTCTAGAGGAATCACTAAATGATGCTGGAAGGCGTAGTAGGTTATGGTCACCGGAAGATATTGGTAATGTGATGTCAGAAAACAAAGGCACTGATTTGGTCCAAGTTATACATCTTCAATCACCTATGCCATATGAGATGAATTGGGGCCCTGAAGCATTCTCTGCAATGTGTAGCCTTACAATACTCATTATATTATGTGATGTGTACCTTCCTCAAGGTCTAAAATTTCTTCCTAGTTCAATAAAATTTCTTGAATGGAAAGCATATCCTTTGAAATCTTTGCCCTTTGGTAGTCATCTTGATAAACTGGTGCTCCTTAAAATGCATCACAGCAAGGTTACACAACTTTGGGGGAGAGCACAAGTATGA 1524 0.3648 MNNSTIAPWKYHVFLSFRGEDTRKGITDHLHAALEQRGIITFLDDKLNRGEVISNQLLRAIDESLISLVILSESFASSSWCLDELQRILESKKNLGREVIPIFYNIDPSDVRQQRGSFARALQKHGESFANNKEKVQRWKDALHEVANISGYDSTDQHEAKLIEEITGKVWAKIQPKLPYFFYNELVGMESRLEEMNSLLNIGLSDVRLIAIWGMTVHGEFEIYKAKLLNNYESLQLFCKKAFKMDKPIDSYSKLCKDIIHQADGLPLTLEVLGCYFCGKSELEWKEAFEKIKKSPPSNILKRLRISYDALSDSEKKIFLDVACCFKGMIKGQVTQIFEICGDLYPTLGIRELVEKCLLTEFHSNNGACHLGMHDILQKMGRSIVLEESLNDAGRRSRLWSPEDIGNVMSENKGTDLVQVIHLQSPMPYEMNWGPEAFSAMCSLTILIILCDVYLPQGLKFLPSSIKFLEWKAYPLKSLPFGSHLDKLVLLKMHHSKVTQLWGRAQV 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0388 507 SUPERFAMILY "Winged helix" DNA-binding domain 299 408 IPR036390 -
Acco10g0388 507 SMART till_3 10 149 IPR000157 GO:0007165
Acco10g0388 507 Pfam NB-ARC domain 222 298 IPR002182 GO:0043531
Acco10g0388 507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 221 321 IPR027417 -
Acco10g0388 507 ProSiteProfiles TIR domain profile. 9 174 IPR000157 GO:0007165
Acco10g0388 507 Pfam TIR domain 10 177 IPR000157 GO:0007165
Acco10g0388 507 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 152 IPR035897 -
Acco10g0388 507 Gene3D - 228 312 IPR042197 -
Acco10g0388 507 Gene3D - 7 178 IPR035897 -
Acco10g0388 507 FunFam Disease resistance protein (TIR-NBS-LRR class) 7 176 - -
Acco10g0388 507 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 229 501 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0388 Acco-ChrAcco10 10898934 10902165 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0388 223 502 WRKY Transcription Factor Family AT4G12020 31.359 1.49e-32 130