Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0321 ATGGGGACACAACCTCAGCAACCATGTCAAGAGGAAGAGGAAGGTGAGCTGCTAGTGCTAGGTCAGGGAACAACACTTTCTGGCCAATCAATTTCCACAAGTAAAAGTGCAGGGTCTCCATCCAGTAGAAGTGAGAAAACAATGGCTACAGTGGCCAGCAATAACACTTTTCTAAGACTAAATCATCTTGACATCCATGGTGATGATGCTGGATCTCAGGGAGCAGTTGCTGGCAAGAAGAAAAAGAGAGGCCAGCGTGCTGTTGGAGGTGACAAGAGTGGAAGAGGGCTCCGCCAATTTAGCATGAAAGTGTGTGAGAAGGTGGAAAGTAAGGGAAGAACCACTTATAATGAGGTTGCAGATGAACTTGTGGCTGAATTTGCGGACCCAAGCAATAGTGTTTCATCTCCTGATCAGCAACAATATGAGGAAAAAAACATTCGTCGAAGGGTTTATGATGCTTTGAATGTTCTCATGGCAATGGATATAATTTCCAAGGATAAAAAGGAAATTCAATGGAAGGGTCTCCCTCATACAAGTCTGAACGATATTGAAGAATTAAAGACAGAGCGCCTTCAGCTTAGGAATCAGATTGAAAAGAAAGCTGCCTACCTGCAGGAGCTGGAGGAGCAATACATAGGCCTTCAGAATCTCATACAACGAAATGAGCAATTATATGCCTCAGGAAATGCTCCCAGTGGAGGTGTAGCCTTACCATTTATTCTTGTACAGACTCGCCCCCATGCAACTGTTGAAGTGGAAATATCAGAAGATATGCAGCTTGTGCATTTTGATTTCAATAGCTCTCCTTTTGAGCTACATGATGACAACTATGTCCTCAAGGCAATGAAATTCTGTGAGAGACCACAGAGTGATAATATGACACAAAATCTTGTGGACGGCGGTGAAGGTTCTAGCTTTTCAGGCTTGTATCAGGGGCAGGTCGTTCCTTCAGTGTCAAACCAACCGGTTAGAACTCCAACATCGCCGCCTATCCCTGGAATTTTGAAGGCAAGAGTTAAGCATGAGCGTTGA 1035 0.4425 MGTQPQQPCQEEEEGELLVLGQGTTLSGQSISTSKSAGSPSSRSEKTMATVASNNTFLRLNHLDIHGDDAGSQGAVAGKKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSVSSPDQQQYEEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPHTSLNDIEELKTERLQLRNQIEKKAAYLQELEEQYIGLQNLIQRNEQLYASGNAPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSSPFELHDDNYVLKAMKFCERPQSDNMTQNLVDGGEGSSFSGLYQGQVVPSVSNQPVRTPTSPPIPGILKARVKHER 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0321 344 FunFam Transcription factor-like protein DPB 87 180 - -
Acco10g0321 344 Coils Coil 184 225 - -
Acco10g0321 344 PIRSF Txn_factor_DP 5 344 IPR015648 GO:0005667|GO:0051726
Acco10g0321 344 MobiDBLite consensus disorder prediction 22 46 - -
Acco10g0321 344 MobiDBLite consensus disorder prediction 69 95 - -
Acco10g0321 344 SMART DP_2 182 342 IPR014889 -
Acco10g0321 344 PANTHER TRANSCRIPTION FACTOR DP 24 297 IPR015648 GO:0005667|GO:0051726
Acco10g0321 344 SUPERFAMILY E2F-DP heterodimerization region 181 296 IPR037241 -
Acco10g0321 344 CDD DP_DD 180 283 IPR014889 -
Acco10g0321 344 MobiDBLite consensus disorder prediction 1 46 - -
Acco10g0321 344 Gene3D Transcription factor DP 181 303 IPR038168 -
Acco10g0321 344 MobiDBLite consensus disorder prediction 319 344 - -
Acco10g0321 344 Pfam Transcription factor DP 183 297 IPR014889 -
Acco10g0321 344 Gene3D - 88 180 IPR036388 -
Acco10g0321 344 SUPERFAMILY "Winged helix" DNA-binding domain 95 176 IPR036390 -
Acco10g0321 344 Pfam E2F/DP family winged-helix DNA-binding domain 95 175 IPR003316 GO:0005667|GO:0006355
Acco10g0321 344 SMART E2F_TDP_2 92 175 IPR003316 GO:0005667|GO:0006355
Acco10g0321 344 FunFam Transcription factor-like protein DPB 181 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0321 Acco-ChrAcco10 8953917 8959859 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0321 78 284 E2F-DP Transcription Factor Family AT5G02470 53.846 1.21e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Acco10g0321 DP 1.2e-41 No_clan