Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0306 ATGCAGAGACAAGATCATGTTTGTGGTTTCGAGAAGCCCTCTGCAATTCAGCAAAGAGGGATTGTTCCTTTCTGCAAAGGTCTTGATGTGATTCAGCAGGTGCAATCTGGAACTGGAAAAACCGCAACTTTTTGTTCTAGAATTTTGCAACAGGTTGATTACAGCTTATTTGAATGCCAAGCACTAGTTCTTGCTCCTACTCGTGAACTTGCACAACAAATTGAGAAGGTCATGCGAGCTCTGGGTGACTATCTTGGCGTCAAGGTTCATGCTTGTGTGGTGGGCACCAGTGTCTTATCGTTCATTTTCTTGACATTTGATACTTAA 327 0.4281 MQRQDHVCGFEKPSAIQQRGIVPFCKGLDVIQQVQSGTGKTATFCSRILQQVDYSLFECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVVGTSVLSFIFLTFDT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0306 108 PANTHER RNA HELICASE 7 97 - -
Acco10g0306 108 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 99 IPR027417 -
Acco10g0306 108 Gene3D - 1 101 IPR027417 -
Acco10g0306 108 Pfam DEAD/DEAH box helicase 15 96 IPR011545 GO:0003676|GO:0005524
Acco10g0306 108 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 21 108 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0306 Acco-ChrAcco10 8430541 8431076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0306 6 98 Eukaryotic Initiation Factors Gene Family AT3G13920 88.172 2.04e-53 170