Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0282 ATGGTTTTGTTGACTCATTTCTTGTCTGAATTTTATGCCACTATCTGTGTTTCTCCACTGTATGTTATCAGTATACAGGCTGTTGTGTGTTTCCCCAATGGATCAAGTAAAACGATGGAGAAAGTTGCTCATACTGATGAAGCTGATGAGATGCCAGCTTTGCATCCACCAATTTCCGATGCGCCATACAATGCAGAGCCCCAACAGGCTGTCCCCATTAAGTATTCTGTTGTCAGTAGGCGTGGGTTTGGGACTATGGGGAAACACATGCCAGTGCTTGCCAATCAATTCCAAGTTTCTGTTGGTGTTCCAGATGCTGTATTTTTCCAGTATAGTGTTTCTATTACTTCAGAAAAAGATAGAGATGTTGAGAGCAAGGGCATTCGGAGAAAACTGATTGATAGGCTTTACCAAACCTACTCTTCTGAACTTGGTGGTAAAAGGTTTGCTTATGATGGAGGGAAAACTTTGTATGCAGTGGGTCCTCTGCCGCATCAAAAGCTTGAGTTCACAGTAGTACTTGAGGAATCATTGGCAAAATGCAGTTATATTAGTCCTGATGCTGATGGAAACCCTAGCATGGAAAAGAAAAGGTCAAAGTATTCTTTTAAGTCAACAACTTTCAATGTGAAGATAAATTTTGCTGCCGAAGTACCCCTACGGTCTGTTGCTGTTGCCCTGGAAGAAGTTGAGTCAGATTCTAATTCTCAGGATGCTTTGAGAGTGCTTGATACTATTCTGAGGCAGCAAGCAGCTAGCATGAGCTGTCTTTTGGTAAGGCAATCATTCTTTCATGATGACTCGAGGAATTTCACTGATGTTGGAGGTGGGGTAGCAAGAGTTCAAGGTTTTCACTCCAGCTTTCATACTACACAGGGTGGATTGTTTCTCAATATGGATGTGTCCACAACAATGATCTTAACCCCTGGACCTGTAATTAATTTTCTCCTATCCAACCAGAATGTGAGGGAACCCCGTTATATTGACTGGGCAAAGGCCAAGAGAATGCTTAAAAATTTAAGGGTGCGTGCTTCTCATCGCAACCATGAATCTAAAATTATTGGCTTGAGTGAGAAACCATGTAATCAGCAACTTTTTAGTATGAAGGTGAAAAACAGTGAGGGCAGTAATGGAGTGGAGACGGTGGATATTACTGTTTATGAGTATTTTGCTAAACACTGTGGCATTGAACTGACTTCTGCATATCTTCCTTGCCTTGATGTGGGGAAGCCAAAACGGCCTGTCTATCTGCCAATGGAGCTTTGCTCACTCATCCCCCTTCAACGTTATACAAAGGCGTTATCTCCGATGCAGAGAGCTTCTTTAGTTGAAAAATCGCGGCAAAAGCCACAAGATAGAATCAAAACCATAACAGATGCTATGGCACATCATAACTATGATGATGATCCTGTTCTTGCGGCATGTGGCATTTCTATCAAGAAGCAATTTACACAAGTTGAAGGTCGAGTTCTTGAGACTCCAAAATTGAAGGTTGGTAAGAATGGTGAGTGCTTCCCTCGTAATGGACGTTGGAACTTTAATAACAAGACACTTCTACAACCAGCTCACATTGAACTCTGGGCTGTGGTCAACTTTTCAGCTCGTTGTGATACTAGCTACCTTTCAAGGGAGCTTATTAAATGTGGAATGAACAAAGGAATTAAAATTGAACGCCCATATACTTTAATTGAAGAAGATTCACAAATTAGAAGATCTAGCCCTGTTGCAAGAGTTGAAAAGATGTTTGAGCTGCTATATGCTAAGCTTCTTGAAGAACCAGACTTCATTCTTTGTGTCTTGCCAGAGAGGAAAAATTGTGACATTTATGGACCTTGGAAGAAGAAATGTCTGACTGAAGTTGGTGTTATCACACAGTGCATTTCTCCTTTGAAGATCAATGATCAATACCTTACTAATGTACTTCTTAAAATCAATTCTAAGCTTGGCGGAATAAATTCTTTGTTGGCCATAGAGCATTGTGGGCATGTTCCCCTAATAAATGATACTCCCACGCTGATTTTAGGAATGGATGTCTCTCATGATTCCCCTGGTCGATCAGACCTTCCATCAATAGCAGCTGTTGTTGGATCTAGATGCTGGCCCCTAATTTCAAGGTATAGAGCATCTGTGCGAACACAATCATCTAAAGCGGAGATGATTGATGCTCTATACAAGCCTTTGGAGGATGGGAAAGATGATGGCATGATCAGAGAACTACTTTTGGATTTCTATCATTCAAGTAATGGACGAAAACCTACTCAAATTATTGTCTTCAGGGATGGGGTTAGTGAATCACAATTTAATCAGGTTTTGAACATTGAGCTGGATCAAATAATTAAGGCCTATCAACATCTTGGAGACGCTGATGCTCCCAAGCTCACATTAATTGTGGCACAAAAGAATCATCATACAAAGTTGTTTCATGCTAATGGTTCAGATAATGTCCCTCCTGGGACAGTCGTTGACACACAAATTGTGCATCCGCGGAATTATGATTTCTACCTGTGTTCACATGCAGGGAATCTTGGAACTCCTAGGCCAGCACATTACCATGTGTTACTAGATGAGATTGGTTTCTCAGCGGATGACTTGCAAAATTTAATCCATTCGCTGTCTTATGTGTACCAGAGGAGTACAGCTGCAACTTCAGTTGTGGCACCCATATGCTATGCCCACCTTGCCGCTGCTCAGATGAGGCAATTTTTGAAGTCTGATGATTCATCAGAGACACCCTCAATTTTGACTACTGAACTAGATGTTCCAATCCCAGAGCTTCCGAGGTTGCATCACAATGTTCAGAGTAGCATGTTCTTCTGTTGA 2820 0.4149 MVLLTHFLSEFYATICVSPLYVISIQAVVCFPNGSSKTMEKVAHTDEADEMPALHPPISDAPYNAEPQQAVPIKYSVVSRRGFGTMGKHMPVLANQFQVSVGVPDAVFFQYSVSITSEKDRDVESKGIRRKLIDRLYQTYSSELGGKRFAYDGGKTLYAVGPLPHQKLEFTVVLEESLAKCSYISPDADGNPSMEKKRSKYSFKSTTFNVKINFAAEVPLRSVAVALEEVESDSNSQDALRVLDTILRQQAASMSCLLVRQSFFHDDSRNFTDVGGGVARVQGFHSSFHTTQGGLFLNMDVSTTMILTPGPVINFLLSNQNVREPRYIDWAKAKRMLKNLRVRASHRNHESKIIGLSEKPCNQQLFSMKVKNSEGSNGVETVDITVYEYFAKHCGIELTSAYLPCLDVGKPKRPVYLPMELCSLIPLQRYTKALSPMQRASLVEKSRQKPQDRIKTITDAMAHHNYDDDPVLAACGISIKKQFTQVEGRVLETPKLKVGKNGECFPRNGRWNFNNKTLLQPAHIELWAVVNFSARCDTSYLSRELIKCGMNKGIKIERPYTLIEEDSQIRRSSPVARVEKMFELLYAKLLEEPDFILCVLPERKNCDIYGPWKKKCLTEVGVITQCISPLKINDQYLTNVLLKINSKLGGINSLLAIEHCGHVPLINDTPTLILGMDVSHDSPGRSDLPSIAAVVGSRCWPLISRYRASVRTQSSKAEMIDALYKPLEDGKDDGMIRELLLDFYHSSNGRKPTQIIVFRDGVSESQFNQVLNIELDQIIKAYQHLGDADAPKLTLIVAQKNHHTKLFHANGSDNVPPGTVVDTQIVHPRNYDFYLCSHAGNLGTPRPAHYHVLLDEIGFSADDLQNLIHSLSYVYQRSTAATSVVAPICYAHLAAAQMRQFLKSDDSSETPSILTTELDVPIPELPRLHHNVQSSMFFC 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0282 939 Pfam N-terminal domain of argonaute 89 247 IPR032474 -
Acco10g0282 939 Gene3D - 490 656 - -
Acco10g0282 939 Pfam Argonaute linker 2 domain 452 497 IPR032472 -
Acco10g0282 939 Gene3D - 662 939 IPR036397 GO:0003676
Acco10g0282 939 SMART PAZ_2_a_3 304 448 IPR003100 GO:0005515
Acco10g0282 939 FunFam Protein argonaute 3 663 939 - -
Acco10g0282 939 FunFam Protein argonaute 7 304 430 - -
Acco10g0282 939 CDD PAZ_argonaute_like 309 425 - -
Acco10g0282 939 SUPERFAMILY Ribonuclease H-like 591 901 IPR012337 -
Acco10g0282 939 SMART DUF1785_2 257 309 IPR014811 -
Acco10g0282 939 Pfam Argonaute linker 1 domain 259 306 IPR014811 -
Acco10g0282 939 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 68 905 - -
Acco10g0282 939 Pfam Piwi domain 595 903 IPR003165 GO:0003676
Acco10g0282 939 ProSiteProfiles PAZ domain profile. 334 426 IPR003100 GO:0005515
Acco10g0282 939 ProSiteProfiles Piwi domain profile. 595 903 IPR003165 GO:0003676
Acco10g0282 939 SUPERFAMILY PAZ domain 304 466 IPR036085 GO:0005515
Acco10g0282 939 CDD Piwi_ago-like 470 902 IPR045246 -
Acco10g0282 939 Gene3D paz domain 303 430 - -
Acco10g0282 939 Pfam PAZ domain 314 442 IPR003100 GO:0005515
Acco10g0282 939 SMART Piwi_a_2 595 903 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0282 Acco-ChrAcco10 7477105 7485876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0282 64 939 Eukaryotic Initiation Factors Gene Family AT5G43810 37.118 3.13e-167 512