Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0262 ATGTGCTGCTGCTGGTGCTCTCTTGCTCAAGAAGCACGTACTGGGAACTCCCATGCTTGGATGTCCGCAAGCGCCCCAAGCATCCCTCCTGCTCTTGCTTCTCGCACTTATCATTTACAATGTCTTTCTCCACCTCTTAAGCGCATCCCCATGGGAAAGTGGCAATGTCCAACCTTCTCTCAAGGAAATGATCGACTAAAGGCCATAAACCACCTGGATTCAATTGCAAAACGAGCCAGGTCAAAAGTTGTCTCTGCAAAAGCAAAAGATGGAGTTAGTTCACTTAATATTGACAAAGCCATCACATATCTAACCTTGTTGAAACACCTGAACAATAGTCCTGGTCCACATCTTATCGTATGCCCAGCTTCTGTTTTGGAAAATTGGGAAAGTGAGCTGCAAAGCTGGTGTCCATCCTTTTCTGTTCTACAATACCATCGGATGCTTAGATTCAATGAGATGCTGCAGATCAAATGTGGATGCCAAGTAGAATATAAAGATGTCCTTCCAGATCAGAATACGTATGCATTTGCAGAGGCTCCAAATGTAGCCCTTCCTCTTTATTGCAGACCCAATTTTGGTGCTGCATGGTTGACCCAATATGAATTCAAGGTCAATGAGACCTATAACTGCTGGTACAAATCTGGCATCCACAAAGTGCAATTAGATCAAGATGATCTTTTCGGTTGCCTTGCATATGAGAAATATACTATGGACACAATTACACAATATTTCACTCACACAGAAACTACGGCTAATGATCGACCTGCAAAGGCTACGGCTATAAAGCAAGGTGGGGGTGTTGGAATGATACTTATTGATCACAATGCTAAATATGGTGGCTTTCAGTTTGTCATCCCATGCACTATTATTAAGGGAACTGTACAAGAGCTACAGGCATACATGAACACAGACAAGAACCCAGGTGTTATGATCTTGTCAACAATAACTGTTGTAGATGTTAAACATTCACCAGAAGTTGCGGCGTTTTCTTCTGTGTGA 1002 0.4271 MCCCWCSLAQEARTGNSHAWMSASAPSIPPALASRTYHLQCLSPPLKRIPMGKWQCPTFSQGNDRLKAINHLDSIAKRARSKVVSAKAKDGVSSLNIDKAITYLTLLKHLNNSPGPHLIVCPASVLENWESELQSWCPSFSVLQYHRMLRFNEMLQIKCGCQVEYKDVLPDQNTYAFAEAPNVALPLYCRPNFGAAWLTQYEFKVNETYNCWYKSGIHKVQLDQDDLFGCLAYEKYTMDTITQYFTHTETTANDRPAKATAIKQGGGVGMILIDHNAKYGGFQFVIPCTIIKGTVQELQAYMNTDKNPGVMILSTITVVDVKHSPEVAAFSSV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0262 333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 157 IPR027417 -
Acco10g0262 333 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 61 IPR013083 -
Acco10g0262 333 SUPERFAMILY FYVE/PHD zinc finger 35 63 IPR011011 -
Acco10g0262 333 Gene3D - 199 319 - -
Acco10g0262 333 Gene3D - 98 174 IPR038718 -
Acco10g0262 333 Pfam SNF2-related domain 99 149 IPR000330 GO:0005524|GO:0140658
Acco10g0262 333 CDD PA_subtilisin_like 254 308 - -
Acco10g0262 333 PANTHER OSJNBA0083N12.13 PROTEIN 162 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0262 Acco-ChrAcco10 6720539 6722348 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0262 253 332 Subtilisin-like Serine Gene Family AT5G67360 40.698 1.67e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Acco10g0262 SNF2_N 5e-07 CL0023