Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0256 ATGTCATCTACAGCAAACTCTCCATGCGCGGCTTGCAAGATGCAGAGAAGGAAATGTACGCCGGAATGCGTGTTTGCGCCATATTTTCCTGCAGAGAATCCTCAGAAGTTTGCTTGCGTGCGCAAGGTTTTTGGTGCGAGCAATGTGGCCAAGATTCTAAATGACGTTAGCGTCGTGCAGCGTGGGGATGCCGTCAGATCGTTGGCTTTTGAAGCGGAGGCCCGCCTTCAGGACCCTGTATACGGCTGCGTTGGCATCATCTCCGGCCTCCAGCACCGGCTAAATCAGCTGCAGAGTGAACTCATCGACGCCAGAAAAGAACTTGCCGCCTATATGGGCCAACAGGCCTTACTTGCCAACCACGTAATGGGATTCAGTCGACAGGAGCTTTTGACTATCAATGTCAGCGGCGGCGGTGGCGGCCGAGGTGGCTATGGTGGATACCCTATGGCTGGAACACTTGTCTCTCATCAGGTTGATGTGCATTCTGAGCAATGGATGTTGCCACAGAAAGGTGAGGCAAGTAGAACTATGGGTCCATATACCCGTGCTTTATATGGACAACCTTGTCTTTTTTAA 579 0.5181 MSSTANSPCAACKMQRRKCTPECVFAPYFPAENPQKFACVRKVFGASNVAKILNDVSVVQRGDAVRSLAFEAEARLQDPVYGCVGIISGLQHRLNQLQSELIDARKELAAYMGQQALLANHVMGFSRQELLTINVSGGGGGRGGYGGYPMAGTLVSHQVDVHSEQWMLPQKGEASRTMGPYTRALYGQPCLF 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0256 192 Pfam Lateral organ boundaries (LOB) domain 8 103 IPR004883 -
Acco10g0256 192 Coils Coil 87 114 - -
Acco10g0256 192 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Acco10g0256 192 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0256 Acco-ChrAcco10 6383299 6383877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0256 3 118 AS2 family AT5G66870 68.103 5.61e-53 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco10g0256 LOB 6.1e-40 No_clan