Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0247 ATGAGGCTTAGGGCATCTTTTCTCCACAACAAGATCAATGCAGGTTCTTTTCTGGCAATGACAGCAACTGCTACAACCATAACTTTAAATTCTGTCATGTCTGCTTTGGATATTCCTTGCACAAATCTCATCCAGAAGACACAGTTGACAGACAATTTGCATTTATCAGTCTCTTTAGCTAGAAATAGACAAGTTAAATGCTCCTAAGCTATCATAGCTTCCGAGCGTAGCTATGTACAGGAGCTGTTTGGTTCCAACAAGATCAGAGTGATTGTTGCCACTGTTGCATTTGGCATGGGATTAGACAAAAGGGATGTTGGAGCTGTAATTCATTACTGTCTGCCAGAAAGTCCTGAGCATTACGTTCAGGAGATTGGACGTGCCGGAGGGGATGGGAGTGATGGAGTAGATGAATATGCAGTGAACATGTTTCTCTGTGAAGTATTTCCTGCTCACAGGATTTCCAGCGGCCAAATATGTTCCTTGATCAAAGAATCTGCTTCATGGAGGTTTGACATGAAGGAAGAGGTGATGCCGACGCTTTTGACCTGCTTGGAGCTGGGTGATGTGCAGTACTTACGTTTACTTCCACAGATAAATACCACTTGCACTTCGAGTTTTCACAAGACTCCCCCTCCATTACTTGCCCAAAAGGACTCTGCTGGTGCTGCGATACTGAAAAGGTCTGAAAATAAGCAAGGGCTATATGTTTTTGACTTGCCCTCTGGCTAA 732 0.4372 MRLRASFLHNKINAGSFLAMTATATTITLNSVMSALDIPCTNLIQKTQLTDNLHLSVSLARNRQVKCSXAIIASERSYVQELFGSNKIRVIVATVAFGMGLDKRDVGAVIHYCLPESPEHYVQEIGRAGGDGSDGVDEYAVNMFLCEVFPAHRISSGQICSLIKESASWRFDMKEEVMPTLLTCLELGDVQYLRLLPQINTTCTSSFHKTPPPLLAQKDSAGAAILKRSENKQGLYVFDLPSG 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0247 243 PANTHER DNA HELICASE RECQ FAMILY MEMBER 73 135 - -
Acco10g0247 243 Gene3D - 48 164 IPR027417 -
Acco10g0247 243 SMART helicmild6 53 132 IPR001650 -
Acco10g0247 243 Pfam Helicase conserved C-terminal domain 71 129 IPR001650 -
Acco10g0247 243 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 28 186 IPR001650 -
Acco10g0247 243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 141 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0247 Acco-ChrAcco10 6017230 6020000 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0247 76 147 Eukaryotic Initiation Factors Gene Family AT1G72730 36.111 5.12e-07 48.1